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SCNpilot_expt_1000_bf_scaffold_4493_23

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 48 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(16240..16515)

Top 3 Functional Annotations

Value Algorithm Source
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 id=12493457 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 92.0
  • Bit_score: 186
  • Evalue 1.10e-44
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 similarity KEGG
DB: KEGG
  • Identity: 96.7
  • Coverage: 91.0
  • Bit_score: 182
  • Evalue 5.20e-44
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 92.0
  • Bit_score: 186
  • Evalue 1.60e-44

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 276
ATGGGTGGAAAATCCGGCGGCAAGTTCGCCAACAAGCGCCGCGACAGCGGCAACCGCGGCCTCTTCAAGCGCCGCAAGTTCTGCCGCTTCACCGCTGAAAAGGTGGTTGAAGTCGATTACAAGGACATCGAAGTGCTGAAGGAATTCATCGCCGAGAACGGCCGCATCATTCCGGCCCGCATTACCGGCACCAAGGCGCATTACCAGCGCCAGCTGGGCACCGCGATCAAGCGTGCGCGCTTCCTGGCACTGATGCCGTACACCGACCTGCATTGA
PROTEIN sequence
Length: 92
MGGKSGGKFANKRRDSGNRGLFKRRKFCRFTAEKVVEVDYKDIEVLKEFIAENGRIIPARITGTKAHYQRQLGTAIKRARFLALMPYTDLH*