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SCNpilot_expt_1000_bf_scaffold_4995_1

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 48 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 1..822

Top 3 Functional Annotations

Value Algorithm Source
extracellular solute-binding protein; K02055 putative spermidine/putrescine transport system substrate-binding protein id=12494729 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 274.0
  • Bit_score: 547
  • Evalue 1.00e-152
extracellular solute-binding protein; K02055 putative spermidine/putrescine transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 264.0
  • Bit_score: 341
  • Evalue 2.60e-91
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 266.0
  • Bit_score: 341
  • Evalue 8.90e-91

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Taxonomy

RLO_Rhodoferax_60_11 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 822
GCCCACTTCGATGTCATCGCCGCCAACACGGCCGAGATGGTGCATTACATCGACAGCGGTCTGATCCAGCCGATCGAGACAGGCAACATTCCCAATCTGCGCCGGCAACTGCCCCGCTTCAGGCCCTTGAGCGCCATCCCCGGTATTACCCGGGCCGGCAGCGTGTACGCCATTCCTTATACCTATTCCGAAATGGGCCTGATCTACGATCGCCGACGCTTCAAGACCGCCCCGGCTTCGTACGCCGACTTGTGGAATCCCCGCTACGCCGGGCAGATACTGCTGTTCGATGGCGGCACGCATAATTTCTCGCTGGCGGCCATGGCGCTCGGACTCGATCCGTTCCGCATTCCGTCCGCAGAATTCCCGCGCGCACTGAAGAAGCTGCTGGCTTTGCGCCGTAATGCACTGGTGTTCTACAGCCTGCCCGAAGAAGCGGCCCGGTTGTTTCGCGAACAGTCCGCTGCCCTGCTGTTTGCCAACTACGGCAGCCAGCAGGTCAAGTTGCTGCGCGACGCCGGGGTCGACATCGGCTATGCCGTCCCGCGCACCGGCGCACTGGCCTGGCTCGATTGCTGGGCCGTCAGCCGCGGAGCGCGTAACAAGGCACTGGCGGAAGCATGGATCAATTACACGCTGGAGCCCGGCGTCAGCCACGCCTTGAGTGTGCGCCAGGGACTGGCCAACACCCTGGAAACCTCCGCCGCCTCGCGCCCCGGCGATCCCCTCATCTGGCTCGAACCGGTAGAAGACGGCGCCCGGCGTACCCGGTTATGGCAGCGCATCCTGTCCGGCGAGCGCGAAGCCCTCCTGCTGCAATGA
PROTEIN sequence
Length: 274
AHFDVIAANTAEMVHYIDSGLIQPIETGNIPNLRRQLPRFRPLSAIPGITRAGSVYAIPYTYSEMGLIYDRRRFKTAPASYADLWNPRYAGQILLFDGGTHNFSLAAMALGLDPFRIPSAEFPRALKKLLALRRNALVFYSLPEEAARLFREQSAALLFANYGSQQVKLLRDAGVDIGYAVPRTGALAWLDCWAVSRGARNKALAEAWINYTLEPGVSHALSVRQGLANTLETSAASRPGDPLIWLEPVEDGARRTRLWQRILSGEREALLLQ*