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SCNpilot_expt_1000_bf_scaffold_5146_6

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 48 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 5475..6044

Top 3 Functional Annotations

Value Algorithm Source
porphobilinogen deaminase (EC:2.5.1.61); K01749 hydroxymethylbilane synthase [EC:2.5.1.61] similarity KEGG
DB: KEGG
  • Identity: 94.7
  • Coverage: 190.0
  • Bit_score: 352
  • Evalue 6.00e-95
Porphobilinogen deaminase {ECO:0000255|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000255|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000255|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000255|HAMAP-Rule:MF_00260}; Short=HMBS {ECO:0000255|HAMAP-Rule:MF_00260};; Pre-uroporphyrinogen synthase {ECO:0000255|HAMAP-Rule:MF_00260}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.7
  • Coverage: 190.0
  • Bit_score: 352
  • Evalue 2.70e-94
porphobilinogen deaminase n=1 Tax=Thiobacillus thioparus RepID=UPI00036D392C similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 190.0
  • Bit_score: 354
  • Evalue 8.60e-95

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
ATGCACACCCTGACCATCGCCTCCCGTGAAAGCGCCCTTGCCATGTGGCAGGCCGAGCATATTCGCGACCGCCTGCGCGCCCTCCATCCCGACTGCGTGGTGAATATTCTGGGCATGACTACGCGGGGCGACCAGATCCTCGACGTCACGCTGTCCAAGATCGGCGGCAAGGGCCTGTTCGTCAAGGAGCTCGAGGTGGCGCTGGAGGCCGGCCAGGCCGACCTCGCGGTGCATTCGATGAAGGACGTGCCGATGGAACTGCCGCCCGGTTTCGAACTGGCGGTGATCGGCGAGCGTGAGGATCCGCGCGACGCCTTCGTGTCGAACCGCCATGCACACCTGTCCGATTTGCCCCCCGGCAGCGTGGTCGGCACGTCCAGCCTGCGCCGCGAAGCGCAACTGCGCGCGCGCTATCCCCATCTGAGCGTGAAGCCGCTGCGCGGCAACGTCGGCACGCGGCTGAAAAAGCTCGACGAGGGCCAGTTCGACGCGATCCTGCTGGCGGCCGCGGGTCTCAAGCGGCTTGGCCTCGGCGATCGCATCAAGAGCCTGCTGTCCGTGGAGGACAGC
PROTEIN sequence
Length: 190
MHTLTIASRESALAMWQAEHIRDRLRALHPDCVVNILGMTTRGDQILDVTLSKIGGKGLFVKELEVALEAGQADLAVHSMKDVPMELPPGFELAVIGEREDPRDAFVSNRHAHLSDLPPGSVVGTSSLRREAQLRARYPHLSVKPLRGNVGTRLKKLDEGQFDAILLAAAGLKRLGLGDRIKSLLSVEDS