ggKbase home page

SCNpilot_expt_1000_bf_scaffold_6790_4

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 48 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 2356..2868

Top 3 Functional Annotations

Value Algorithm Source
RND multidrug efflux membrane fusion protein MexE id=12493469 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 171.0
  • Bit_score: 318
  • Evalue 3.60e-84
  • rbh
RND multidrug efflux membrane fusion protein MexE similarity KEGG
DB: KEGG
  • Identity: 69.8
  • Coverage: 172.0
  • Bit_score: 216
  • Evalue 7.90e-54
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 169.0
  • Bit_score: 256
  • Evalue 3.10e-65

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 513
ATGAATCAGCACATGACGATCATTGCACTGTCCGGATTGAGCCTGCTGGGGATCAATCCGGCATGGGCCGCAGACAAGGTTGAACTCACCACCCGCGTATCCGGCGTGGTGGAATCGGTGCTGGTCAAGCCCGGCCAGCGCGTGAAGAAAGGCGCTGTCCTGCTGCGTCTGGACAAGACCATCCTGCAGGCGCGTCTCGAGGAAGCCGTGGCGGAGCATGCGCGCGCGCAGGCCGATGAGGCCGATGCCAAGCGCGAGCAGGGACGGGCGCAGGAACTGTACGACCGGACGGTGTCGTCGACCAGCGAACTGGAGGCCGCCGAATTGCGCTACACGCGTGCCCAGGCCGCGCTGTCCGCGGCCCAGGCACGCCGGGTGATCGCGCAGAAAAATCTGGCGGATGCCGAACTGAAAGCGCCGTTCGACGGCGTCGTGAGCGCGATCCCGGGCGGTTCCGGGACCGTCGTGGTGGCGGATTGCCAGCCGAAACCGCTGATCGTCCTGTCGCGTTGA
PROTEIN sequence
Length: 171
MNQHMTIIALSGLSLLGINPAWAADKVELTTRVSGVVESVLVKPGQRVKKGAVLLRLDKTILQARLEEAVAEHARAQADEADAKREQGRAQELYDRTVSSTSELEAAELRYTRAQAALSAAQARRVIAQKNLADAELKAPFDGVVSAIPGGSGTVVVADCQPKPLIVLSR*