ggKbase home page

SCNpilot_expt_1000_bf_scaffold_6894_3

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 48 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(4608..5648)

Top 3 Functional Annotations

Value Algorithm Source
TPR repeat-containing protein id=12493048 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 255.0
  • Bit_score: 487
  • Evalue 9.10e-135
TPR repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 63.1
  • Coverage: 255.0
  • Bit_score: 301
  • Evalue 2.90e-79
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 255.0
  • Bit_score: 327
  • Evalue 2.90e-86

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1041
CTGATGAGTGCGTGTAACGGAGAGGACAGCACCACCCTGGTCACCGACGCCCGGGCGAAACTCGTGGCGGGCGATTACCAGACGGCGATGATTCAGCTGAAAAACGCCGTGGCGAAGGACGAAAAAAACGCCGAAGCGCGCTTCGAACTGGGCAAGCTGTATTTCACCCGGCTTGAACTCGCCAATGCGGAGAAAGAATTCCGCCGGGCACGTGAAGCCGGCTTTCCGGCCGGCACGGTCAACCCGATGATCGCGCGCGCGCTGCTGGGACAGCGTGAATATCAGCGCGTGCTGGACGAGCTTCCGGCGCCGGCCGACAGCGATCCCGATTCCGCCACGCTGCAGGCATTACGCGCCGTCGCCGAACTCGGACTGACGCGCAAGGAAGAAGCACGCAAACTGTTGCGGCACGCGCAAGCGATCGCGCCCGCCAATCCCGAGGTATATCTCGCGCTGGCGCAACTGGCCCTGGCCGACCACGATCCCGCCAAAGCCATGCAGGACATCGATGCCGCCTTGCGCATCGACCCCAAACACCGTGACAGCCTGCTGCTGAAAGGCGATCTGCTGCGCACGGCGGGCAAGCCGGATGAGGCCGCCGCCGTCTATCGCCAGGTCCTGCAAATCGATCCGCTCCACAGCAGCACGATGCTCGCGCTGGCGGGTATCGCCATTTCCGGCAACAAGCTGGACGAGGCGCGCAAGGAAGTCGACGCCGCGCTGAAAATCACGCCCGCCAGCCTGCAGGCCCGCTATACGCAGGCAAGAAAACCGAACAGGCGCGCGACCGTCTCGCCTCGGTACTCAAGGCGGCGCCCGATTATCCCCCCGCGCTGCTCCTGGGCGGCACGATCGAGTACACGCTCGGCAACCTGCAAACCGCCGAGGCGTACCTCAACAAGGTGGTCAAGGCCACCCCGAACAATCTCTATGCACTGCGCCTGCTGGCCGCCTCGCAACTGCGGCTGGGGCGCCCCGACGATGCGGCGGCCACACTCGCGCCCGCCCTTGGATCAGCCGATCACGACGCCGGCGTATTGA
PROTEIN sequence
Length: 347
LMSACNGEDSTTLVTDARAKLVAGDYQTAMIQLKNAVAKDEKNAEARFELGKLYFTRLELANAEKEFRRAREAGFPAGTVNPMIARALLGQREYQRVLDELPAPADSDPDSATLQALRAVAELGLTRKEEARKLLRHAQAIAPANPEVYLALAQLALADHDPAKAMQDIDAALRIDPKHRDSLLLKGDLLRTAGKPDEAAAVYRQVLQIDPLHSSTMLALAGIAISGNKLDEARKEVDAALKITPASLQARYTQARKPNRRATVSPRYSRRRPIIPPRCSWAARSSTRSATCKPPRRTSTRWSRPPRTISMHCACWPPRNCGWGAPTMRRPHSRPPLDQPITTPAY*