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SCNpilot_expt_1000_bf_scaffold_7711_5

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 48 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(2566..3936)

Top 3 Functional Annotations

Value Algorithm Source
PLP-dependent enzyme, glutamate decarboxylase id=12493007 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 98.2
  • Coverage: 457.0
  • Bit_score: 904
  • Evalue 3.10e-260
  • rbh
PLP-dependent enzyme, glutamate decarboxylase similarity KEGG
DB: KEGG
  • Identity: 64.1
  • Coverage: 454.0
  • Bit_score: 595
  • Evalue 1.70e-167
PLP-dependent enzyme, glutamate decarboxylase {ECO:0000313|EMBL:AGA24650.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 454.0
  • Bit_score: 595
  • Evalue 7.50e-167

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1371
ATGCCATTCGACCGGGAAAGCCTGGCCCTGCTGGACGAAGCCCTGGCCGTCCTGGCGGATGGCTTTCGCCACCTTCCCGACGTGCCGCGGACCGCTCGCATGAGCGAACTGCGCGAACCCCTGCTCGCCGCTGCCCGCCGGCTGCAGGACAACGCGCCCTACCATCATCCGCTCTACGTCGGGCACATGCAGAAGCCGCCGCACCCTGTCGCGCGGCTGGCCTACACGCTGGCCCTCTGGCTCAATCCGAACAATCACGCCTACGATGGCGGGCGCGCCAGTTCAGTCATGGAACGGGAAGCCATCGGCGAAATCGCGCGCATGGTCGGCTGGACGTCCAGTCAGGGACATCTGTGCAGCGGCGGCACGCTGGCCAATTTCGAGGCGCTCTGGGTCGCGCGCGAACTGCATCCCGGCAAGGGCATCGTCGCGTCCAGCCAGGCCCACTACACCCACGAACGCCTGTCCGGCGTGCTTGGCGTATCGTTCCGCGCCATTGCGACCGATGCAAGGGGACGCATGGACCCCGCCGCGCTGGAAGACGCCTTGCAGGACGGCACGATCGGCACCGTGGTCGTCACCCTGGGCACGACCGCCAGCGGCGCCGTCGATCCGCTCGAGCGGATCCTCGCCCTGCGCGCGCGCCACGCCTTCCGGATTCATGTCGACGCCGCTTACGGCGGTTACTTTACGCTGGCCGACAACCTGGACGCCGACACCCGGCAGGCGTTCAATTGCGTGGCGCAGGCCGACTCCATCGCCATCGATCCTCACAAGCACGGCCTCCAGCCCTATGGCTGCGGCTGCGTGCTGTTCCGCGACCCCGCCGTCCGGCGCCACTACCGCCATGACTCGCCCTATACCTACCTGAGTTCGGACGATCCGCATCTGGGCGAGATTTCCCTGGAATGCTCCCGCCCGGGCGCCGCCGCCGTGGCGCTGTGGGCCACCCAGCGCCTGCTGCCGCTGGTGGCCGGCGGCACCTTCGCGCAAGACCTGGCGGCCGGCCGCATGGCCGCCCTGGCCCTGCATCGCGCCCTGGCCGCGGACACGCGTTTCGCTCCGCTCTCCCCGCCCCAGCTCGACATCGTGGTCTGGGCCGTCCGGGCCGACACCGCCAGTCAGGCTTCACTGCGCGCACGCGCGCTGCATGCCGCGGCCGCAAAACACGACCTGCACCTGTCTCTCGTCGCGCTCCCCCAGGCCATGCTCGAACCCCACGATCCCGTCCGTGCATGGGATGCGGAAACCATCGTCTGTCTGCGCGCCTGCGTGATGAAACCCGAACATCGCGAATGGATGAGCGGGATTCTGGCCCGTCTGGATGCCGCCGCCCGGGCCACCGGACAGGAATCCCCGCAAAGCCGGTGA
PROTEIN sequence
Length: 457
MPFDRESLALLDEALAVLADGFRHLPDVPRTARMSELREPLLAAARRLQDNAPYHHPLYVGHMQKPPHPVARLAYTLALWLNPNNHAYDGGRASSVMEREAIGEIARMVGWTSSQGHLCSGGTLANFEALWVARELHPGKGIVASSQAHYTHERLSGVLGVSFRAIATDARGRMDPAALEDALQDGTIGTVVVTLGTTASGAVDPLERILALRARHAFRIHVDAAYGGYFTLADNLDADTRQAFNCVAQADSIAIDPHKHGLQPYGCGCVLFRDPAVRRHYRHDSPYTYLSSDDPHLGEISLECSRPGAAAVALWATQRLLPLVAGGTFAQDLAAGRMAALALHRALAADTRFAPLSPPQLDIVVWAVRADTASQASLRARALHAAAAKHDLHLSLVALPQAMLEPHDPVRAWDAETIVCLRACVMKPEHREWMSGILARLDAAARATGQESPQSR*