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SCNpilot_expt_1000_bf_scaffold_8684_5

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 48 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(3297..3752)

Top 3 Functional Annotations

Value Algorithm Source
Fur family ferric uptake regulator; K03711 Fur family transcriptional regulator, ferric uptake regulator id=12494392 bin=THIO_HI species=Thiothrix nivea genus=Thiothrix taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 140.0
  • Bit_score: 286
  • Evalue 1.80e-74
Ferric uptake regulator, Fur family {ECO:0000313|EMBL:EIJ33595.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.0
  • Coverage: 143.0
  • Bit_score: 141
  • Evalue 1.30e-30
Fur family ferric uptake regulator; K03711 Fur family transcriptional regulator, ferric uptake regulator similarity KEGG
DB: KEGG
  • Identity: 43.9
  • Coverage: 132.0
  • Bit_score: 120
  • Evalue 4.00e-25

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 456
ATGCAGCCCGCCTCTGGCCGGGTCTTGCCAGGCGCCATGGCAGACGCCATGTCTGAAACCATCAAACTGATCAAGCCTTACGGCCGGGCAACCCAGGCACGGATCACCGTACTGGACATGCTGCTGTCCGCCACGCACGCCATCAGTCATGCCGAGCTTGAGTCGGCGCTGCTGTCAGCCGGCCGGCAGATCGACCGGGTCACCCTTTACCGCGCACTGGAATGGCTGGTCAGCAAGAATCTGGCGCACAAGATTCCAGGCCGGGATCGCGTCTGGCGCTACAGTGCCGCCTATCAGGAAACCAATCACCACGTTCATTTTCATTGCACGCACTGTGACCAGACCGTCTGCCTGGCCAGCACCAAAACGGATCTGATCCGGCTGCCCAAGGGCTACCAGTTCGAAGAATCCATGCTGGTGATCGAAGGAATATGCCCTCGATGCACGGGACTGTGA
PROTEIN sequence
Length: 152
MQPASGRVLPGAMADAMSETIKLIKPYGRATQARITVLDMLLSATHAISHAELESALLSAGRQIDRVTLYRALEWLVSKNLAHKIPGRDRVWRYSAAYQETNHHVHFHCTHCDQTVCLASTKTDLIRLPKGYQFEESMLVIEGICPRCTGL*