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SCNpilot_expt_1000_bf_scaffold_9726_3

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 48 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 1745..2005

Top 3 Functional Annotations

Value Algorithm Source
FmdB family regulatory protein id=12494508 bin=THIO_HI species=Nitrosomonas sp. genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 87.0
  • Bit_score: 183
  • Evalue 7.00e-44
FmdB family regulatory protein similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 77.0
  • Bit_score: 91
  • Evalue 1.10e-16
Tax=CG_Rhodocyc_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 58.8
  • Coverage: 80.0
  • Bit_score: 94
  • Evalue 7.90e-17

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Taxonomy

CG_Rhodocyc_01 → Rhodocyclales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 261
ATGCCGATTTACGATTATCGCTGCGTACAGTGCAGCACCCCATTCGAGGCCAGCCACGCCATGAACGCGCCTGCGCCCGATTGTCCGAGTTGCGGGGGGCGGGCGGAAAAAGCCATCCTCACGGCGCCGGCGGCGCTTGGCCGCATGGCACAAGGGCGCGAACGCGCCATGCAATCGCTGCAGGCTTCCCGCGCGCAGACCCGTCCCGCCCATGGCGCGGGGTGCAGTTGTTGCGCGCCGCGCAAGACGGGCACGGATTGA
PROTEIN sequence
Length: 87
MPIYDYRCVQCSTPFEASHAMNAPAPDCPSCGGRAEKAILTAPAALGRMAQGRERAMQSLQASRAQTRPAHGAGCSCCAPRKTGTD*