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SCNpilot_expt_1000_bf_scaffold_10232_1

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 48 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(50..3151)

Top 3 Functional Annotations

Value Algorithm Source
hydrophobe/amphiphile efflux-1 (HAE1) family transporter id=12494400 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.9
  • Coverage: 999.99
  • Bit_score: 2003
  • Evalue 0.0
  • rbh
hydrophobe/amphiphile efflux-1 (HAE1) family transporter similarity KEGG
DB: KEGG
  • Identity: 69.2
  • Coverage: 999.99
  • Bit_score: 1450
  • Evalue 0.0
Tax=CG_Rhodocyc_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 76.3
  • Coverage: 999.99
  • Bit_score: 1569
  • Evalue 0.0

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Taxonomy

CG_Rhodocyc_01 → Rhodocyclales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3102
ATGGCGCGCTTTTTCATCCACCGGCCCATCTTCGCCTGGGTCATCGCCATCCTGATCCTGCTGGTCGGGGCTATTGCGCTGAAAAATCTCCCGGTGGCGCAATATCCCCCGGTGGCCGCGCCGCAGGTCGCGTTCAACGTGACCTATCCCGGCGCATCCGCCCAGGTGGTCGAGGACACGGTGATCAAGCTGATCGAACAGCAGATGAACGGCATCGAGCACCTTCTCTACATGGAGGCCACATCCGAGCTGGGTTCCGGCACCCTGACGCTGACCTTCGAGCCCGGCACCAACATCGACATTGCCTCGGTCGAAGCGCAGAACCGCTACAAGCGCGTCGAGGCGCGCCTGCCGGAAGACGTGCGGCGACTGGGCGTGCCGGTGACCAAGCCGCAGCGCAACTATCTGATGTTTGTCGCCATCTTCTCCAAGGACGGCAAGCGCAACGCCACCGATCTCAGCAGCTACGCCGCCGCCAATGTGCTCGACCCCCTGCTGCGGGTGCCGGGCGTCGGCGAAGCCATCCTGTTCGGCAGCGAATACTCCATGCGCATCTGGCTCAAGCCTGAGCAACTCATCGCGTATGGACTCACCCCGGCAGACGTGAAGGCTGCCCTGCAGGCGCAGAACGTCCAGCTCGCCACGGGCGAGCTGAACCAGGCGCCCGCTTCGCCCGGCGCGCAGGTCAACGCGGTGATCGTGACGCGCGGACGTCTCAAGACCCCCGAGGAATTCGGCAACGTCGTGGTGCGCGCCCTGCCCAACGGCGCCACCGTCAAGGTCAAGGACGTGGCGCGCGTGGAGCTCGGCGCCGAAACCTACGATCGTTACGCCCGCATGAATGGCCAGCCGATTGCCGCCATCGCCATTCGCGTCGCGCCCGGCGCCAATGCCCTCGATGTCGCCCAGTCGGTCAAATCACGCATGACGGAACTCGCTCATTTCTTCCCCAAGGGGGTCGACTGGGCCGTCCCCTACGACACGTCGCGTTTCGTCGAGATCTCGATTTTCGAGGTGGTGAAAACGCTGGGCGAAGCCATGATCCTGGTGTTCATCGTGATGTACGTGTTCCTGGGGCACTGGCGCACCACGCTGATTCCGGCCGTGGTGGTGCCGGTGGCGCTGGCGGGCGCGACCGCGGGGCTCTATGCCTTCGGCTTTTCCATCAACGTGCTGACGCTGTTCGCCATGGTGCTGGCGATCGGCGTGCTGGTGGATGACGCCATCGTGGTGGTGGAAAACGTCGAACGCATCATGCGCGAAGAACACCTGCCGCCGATGGCCGCCACCCTCAAGGCGATGGACCAGATTCTCGGTGCGATTCTCGGCATTTCCGTGGTGCTCTCCGCGGTATTCATGCCGATGCTGTTCTTTGGCGGTTCCGTCGGCGCCATCTACCGGCAGTTCGCGACCACCCTGATTCTCACCATGGCCTTCTCGGTATTGATGGCGCTGTCGCTCACGCCCGCCATGTGCTCAACCCTGCTCAAGCCGAGTGAAGCGGAAGAAGACGAAAAACGTGGCTTCAACCGCTTCTTCGGTCGTGTCACCACGCGCTATCACGGCCTCACGGCGCGCATTCTCGCCAGGAGCGGCCGCTGGATGGTGATCTATCTCGCCATCGTGGTCGCGGCCGGCTGGATGCTCACCAAGCTGCCGGGCAGTTTCCTGCCGGACGAGGACCAGGGCTATTTCATTACGCTGGTGCAGCTGCCGGGCGGCGCCACCCAGGAGCGCACGGTCAAGGTGCTCTCCCAGGTGGAACAGTTCTACCTGAAACAGCCGGAGGTGGAACAGGTCATCGGTGTGGTGGGCTTTTCCTTCTTCGGGCGGGGGCAGAACGCGGCACTCGTCTTTACGCGGCTCAAGGACTGGGACGAACGCAAGGGGCCGGAGCATTCGGCCCAGGGCCTCATCGGCAGAGCCATGGGGACCTTCTCGCACATCAAGGAAGCCGTCATTTTTTCGGTGAACCCGCCGCCCATTCCCGAACTGGGCGCAGTGGGCGGATTCGACTTCCGCCTGCTGGACCGTTCGGGGCAAGGCCGCGAAGCCCTGATGGACGTGCGCAACCAGGTCCTCGGCATGGCCGGCCAGGACGCCCGGCTGGCCGGCGTGCGGCCCGAAGGCCAGGAACCGGGACCCCAGATCTACCTCAACCTCGATCGCGAGAAGGCGCAGGCGCTGCAGATTGACATGGCCGACCTCAACGACACCCTGAGTTCGGCCATCGGCGTGGCCTATGTGAACGATTTCGTCAATGCCGGCCGTATCCTCCGCGTGCAGATGCAGGCAGACCCGGACCTGCGCCGGACGCCCGACGACTTGCTGAAGCTTCCCGTGCGGAACCGCCTCGGCGACATCGTGCTGCTGGGCGAGATCGCGCAGCCGAAATGGATCGTGGGCCTGCCCAAGCTGGACCGCTACAACGGCAATCCTTCCATGAAGATCGCCGGTACGCCCGCGCCCGGACATTCTACCGGCGAAGCCATGCAGGCCATGGAAGAGATCGCCGCCAAACTGCCGCCGGGCTTCGGCTTCGAGTGGTCAGGCACCTCGTTCGAGGAACGGATTGCCGGGGCTCAGGCGCCCATCCTGTTCGCCCTGTCCCTGCTGGTGGTATTTCTTGCCCTGGCGGCCCTGTACGAGAGTTGGGCCATTCCCTTCTCGGTGATTCTGGTCGTGCCACTCGGCATTCTCGGCGCGGTGCTGGCGGTGCATCTGCGCGGCCTGCCCAACGACGTATTCTTCAAGGTCGGCCTGGTCGCCATCATCGGCCTGTCGGCCAAGAACGCCATTCTCATCATCGAGTTTGCCCGTCAGCTGCACGATGAAGGCATGGATCTCGTCTCCGCCACGCTCGAGGCCTGCCGTCTGCGCCTGCGGCCCATCCTCATGACCAGCTTTGCCTTTATCCTGGGCGTGATGCCGCTCGCCATCTCGAGCGGCGCCGGCGCAGCCGGTCGCCACGCGGTGGGAACCGGCGTGGTCGGCGGCATGATCGCGGCAACGCTGCTCGCCATTTTCCTGGTTCCGGTGTTTTTCGTGGTGATCCGAAAACGCTTCCCTGCCCGGCCCCGGAAGGAAATGAAACATGACTGA
PROTEIN sequence
Length: 1034
MARFFIHRPIFAWVIAILILLVGAIALKNLPVAQYPPVAAPQVAFNVTYPGASAQVVEDTVIKLIEQQMNGIEHLLYMEATSELGSGTLTLTFEPGTNIDIASVEAQNRYKRVEARLPEDVRRLGVPVTKPQRNYLMFVAIFSKDGKRNATDLSSYAAANVLDPLLRVPGVGEAILFGSEYSMRIWLKPEQLIAYGLTPADVKAALQAQNVQLATGELNQAPASPGAQVNAVIVTRGRLKTPEEFGNVVVRALPNGATVKVKDVARVELGAETYDRYARMNGQPIAAIAIRVAPGANALDVAQSVKSRMTELAHFFPKGVDWAVPYDTSRFVEISIFEVVKTLGEAMILVFIVMYVFLGHWRTTLIPAVVVPVALAGATAGLYAFGFSINVLTLFAMVLAIGVLVDDAIVVVENVERIMREEHLPPMAATLKAMDQILGAILGISVVLSAVFMPMLFFGGSVGAIYRQFATTLILTMAFSVLMALSLTPAMCSTLLKPSEAEEDEKRGFNRFFGRVTTRYHGLTARILARSGRWMVIYLAIVVAAGWMLTKLPGSFLPDEDQGYFITLVQLPGGATQERTVKVLSQVEQFYLKQPEVEQVIGVVGFSFFGRGQNAALVFTRLKDWDERKGPEHSAQGLIGRAMGTFSHIKEAVIFSVNPPPIPELGAVGGFDFRLLDRSGQGREALMDVRNQVLGMAGQDARLAGVRPEGQEPGPQIYLNLDREKAQALQIDMADLNDTLSSAIGVAYVNDFVNAGRILRVQMQADPDLRRTPDDLLKLPVRNRLGDIVLLGEIAQPKWIVGLPKLDRYNGNPSMKIAGTPAPGHSTGEAMQAMEEIAAKLPPGFGFEWSGTSFEERIAGAQAPILFALSLLVVFLALAALYESWAIPFSVILVVPLGILGAVLAVHLRGLPNDVFFKVGLVAIIGLSAKNAILIIEFARQLHDEGMDLVSATLEACRLRLRPILMTSFAFILGVMPLAISSGAGAAGRHAVGTGVVGGMIAATLLAIFLVPVFFVVIRKRFPARPRKEMKHD*