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SCNpilot_expt_1000_bf_scaffold_12697_3

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 48 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(1196..2128)

Top 3 Functional Annotations

Value Algorithm Source
ddl; D-alanine--D-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] id=12494140 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 311.0
  • Bit_score: 620
  • Evalue 1.10e-174
  • rbh
ddl; D-alanine--D-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 302.0
  • Bit_score: 543
  • Evalue 3.90e-152
D-alanine--D-alanine ligase {ECO:0000255|HAMAP-Rule:MF_00047}; EC=6.3.2.4 {ECO:0000255|HAMAP-Rule:MF_00047};; D-Ala-D-Ala ligase {ECO:0000255|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000255|HAMAP-Rule:MF_00047}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 302.0
  • Bit_score: 543
  • Evalue 1.80e-151

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 933
GTGAGCAAGTTTGGAAAAGTCGCCGTGATGCTGGGCGGCACCTCGGCCGAGCGGCCGGTGTCGCTCAACAGCGGGGCGGCGGTGCTGGCGGCATTGACCCGGCAAGGCGTCGATGCGCACGCATTCGATCCGGCCACACGCAATCTCGGCGATCTCATCTCGGGTGAGTTCGACCGCGTGTTCATTGCGCTGCATGGACGCTACGGCGAGGATGGCTGCATGCAGGGCGCGCTCGAACTGCTGGATATTCCCTACACCGGCAGCGGCGTGATGGCTTCGGCCATCGGCATGGACAAGTGGCGCACCAAGCTGTTGTGGCGCGCTGCCGGCCTGCCGACGGCCGACTGGGACATCCTTGACGCGGCAAGCGATTTCGCCGCGACGGAAAAGAAACTTGGCCTGCCGATTTTCGTGAAACCCGCGCGCGAGGGATCGAGCATCGGCATGAGCAAAGTGACGGAGCCGGGTACGCTGCAGGCGGCCTATGAAACGGCCGCCGAACACGACTCGCTGGTCCTGGCGGAGAAATTCATCGACGGTGCCGAGTTCACCGTCGGGATTCTCGGCACGACCGCGCTGCCCCTGATTCGACTGGAACCTGCGCAGGACCGGGCTTTCTACGATTTCGAGGCCAAATATCTGCGCGACGACACCCGCTACCATTGCCCGGCAGGCCTTCCGGACGCCCAGGAAATGGCATTGCGGCAGCTGGCGCTGGAGGCGTTCCGTCTGATCGGCGGATGCGGGTGGGGACGGGTCGACGTGATGCTGGACAGTCTCGGCAATCCCTATCTGCTGGAAATGAATACTTCGCCCGGCATGACCGACCACAGTCTGGTGCCGATGGCCGCGCGTGTCGCAGGGCTGGATTTTGATGCCTTGTGCCTGAAAATCCTGGAGCAGACGTTTATGCCCGACCGGGTGCTGGCATGA
PROTEIN sequence
Length: 311
VSKFGKVAVMLGGTSAERPVSLNSGAAVLAALTRQGVDAHAFDPATRNLGDLISGEFDRVFIALHGRYGEDGCMQGALELLDIPYTGSGVMASAIGMDKWRTKLLWRAAGLPTADWDILDAASDFAATEKKLGLPIFVKPAREGSSIGMSKVTEPGTLQAAYETAAEHDSLVLAEKFIDGAEFTVGILGTTALPLIRLEPAQDRAFYDFEAKYLRDDTRYHCPAGLPDAQEMALRQLALEAFRLIGGCGWGRVDVMLDSLGNPYLLEMNTSPGMTDHSLVPMAARVAGLDFDALCLKILEQTFMPDRVLA*