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SCNpilot_expt_1000_bf_scaffold_18721_1

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 48 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(2..445)

Top 3 Functional Annotations

Value Algorithm Source
OstA-like family protein; K09774 lipopolysaccharide export system protein LptA id=12495138 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 148.0
  • Bit_score: 288
  • Evalue 3.50e-75
OstA-like family protein; K09774 lipopolysaccharide export system protein LptA similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 139.0
  • Bit_score: 213
  • Evalue 4.40e-53
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 148.0
  • Bit_score: 268
  • Evalue 5.20e-69

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 444
ATGAACAAATCGACCCTCAGGTTTTATGCGATGCTGTGCGCCACCCTGCTGGCCACGTCCGTCCATGCGGAAAAAGCGGATCGCGACAAACCGGTCAACCTTGAAGCGGATACCGTCACGCTCGACGACATCAAGAAGATCAGCGTCTACCAGGGCAACGTGGTGTTGAGCCAGGGCACGCTGATGCTGCGCGCCGACCGCGTGCAGGTGACCCAGAATGCGGACGGACTCGACAAGGTCAGCGCGATCGGCCGCCCCGTGGCGTTCCGCCAGAAGACCGATAGCGGCGATGAATACATCGAGGGCTTCGCCGACCGCATCGAATATGACGGCGTCACCAGCCAGCTCGAACTGATCGGCCAGGCGCGGCTGCGGCGCGGCAGCGACGAACTGCGCGGGGCGCAGATTTCCTACAACGCCAACACCGGATTCTACAAGGTCGTC
PROTEIN sequence
Length: 148
MNKSTLRFYAMLCATLLATSVHAEKADRDKPVNLEADTVTLDDIKKISVYQGNVVLSQGTLMLRADRVQVTQNADGLDKVSAIGRPVAFRQKTDSGDEYIEGFADRIEYDGVTSQLELIGQARLRRGSDELRGAQISYNANTGFYKVV