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SCNpilot_expt_1000_bf_scaffold_27758_6

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 48 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(2790..3041)

Top 3 Functional Annotations

Value Algorithm Source
SirA family protein id=12498033 bin=THIO_MID species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 84.0
  • Bit_score: 153
  • Evalue 7.50e-35
SirA family protein similarity KEGG
DB: KEGG
  • Identity: 72.3
  • Coverage: 83.0
  • Bit_score: 133
  • Evalue 3.30e-29
SirA family protein {ECO:0000313|EMBL:ACL71168.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 83.0
  • Bit_score: 133
  • Evalue 1.50e-28

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Taxonomy

Thioalkalivibrio sulfidiphilus → Thioalkalivibrio → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 252
ATGGCCATGAGTTTCAACAAGACCGGCGACCACGAATGGGAGCTGAACGTGTGCGGCTATACCTGCCCGCACCCGCAGATGTACACCAAGAAGGCGCTGCAAAAAATCGAGAGCGGCGACGTGCTGTCGCTGAAATTTGACAACCCTTCGTCGGGCGAGTCGATCCTGGCGATGTGCGAAGCGGAAGGCAGCGACCTCATCGACCGCCAGGACGCCGGCGGCTCCTTCGTCTGGAAGATCCGGAAGGCCTGA
PROTEIN sequence
Length: 84
MAMSFNKTGDHEWELNVCGYTCPHPQMYTKKALQKIESGDVLSLKFDNPSSGESILAMCEAEGSDLIDRQDAGGSFVWKIRKA*