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SCNpilot_expt_1000_bf_scaffold_36212_4

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 48 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(1957..2532)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretory pathway, pseudopilin PulG id=1372871 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 82.3
  • Coverage: 192.0
  • Bit_score: 299
  • Evalue 1.90e-78
type II secretory pathway, pseudopilin PulG; K10924 MSHA pilin protein MshA similarity KEGG
DB: KEGG
  • Identity: 69.2
  • Coverage: 195.0
  • Bit_score: 262
  • Evalue 1.40e-67
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.3
  • Coverage: 192.0
  • Bit_score: 299
  • Evalue 2.70e-78

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 576
ATGTATACCCTGAAGGACATGAAAGCCCGGCAGCACGGCTTCACCATGATCGAACTCATCGTCGTCATCGTCATCCTCGGCATCCTTGCCGCGGTGGCGCTGCCGCGCTTTACCAATGTTCAGCGCGATGCGCGCATTGCCAAGCTGAATGCGGCACGCGGTGCGGTGCAGGCGGCGTCGGCAATGATCCATGGTGCAGCGCTGGCCCGGGGTGGCGTGCCGGATACGGTCAACTGCGTGAACGTTGGTTTTGGCGCGAACCCGGCAAACAACACGACGGCGGTGTGTACGGAAAACGGGCGGGTACAAATTACCAACCTCTATCCTGCTGCCACCGTTCTCGGAATTGTCAATGCCGCGGGCCTGTCCACGACGTTTTTCCCCACGGGGACGACCGTGGCAACGGCCAATACGGCCTTGCAGGCCGAGGGCTACAGCGTGGCCCAAGCAGGAGGTGCGAATATGAATTTCAGGGTCAACGGTGGAGCTAACGTAGCCCAATGCGCCTTTACCTATACGGCCGCCGCCGTGGGCGGAGCGCCTGCGACTGGTGTGATCGACACCAGAGGCTGCTGA
PROTEIN sequence
Length: 192
MYTLKDMKARQHGFTMIELIVVIVILGILAAVALPRFTNVQRDARIAKLNAARGAVQAASAMIHGAALARGGVPDTVNCVNVGFGANPANNTTAVCTENGRVQITNLYPAATVLGIVNAAGLSTTFFPTGTTVATANTALQAEGYSVAQAGGANMNFRVNGGANVAQCAFTYTAAAVGGAPATGVIDTRGC*