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SCNpilot_expt_1000_bf_scaffold_60344_3

Organism: SCNPILOT_CONT_300_BF_Plasmid_like_65_34

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(555..1190)

Top 3 Functional Annotations

Value Algorithm Source
sex pilus assembly protein n=1 Tax=Pseudomonas sp. 313 RepID=UPI0002D32DB4 similarity UNIREF
DB: UNIREF100
  • Identity: 40.7
  • Coverage: 177.0
  • Bit_score: 111
  • Evalue 8.30e-22
Uncharacterized protein {ECO:0000313|EMBL:AHZ73617.1}; TaxID=1147786 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mandelii JR-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.5
  • Coverage: 208.0
  • Bit_score: 109
  • Evalue 4.40e-21
TraF-like protein similarity KEGG
DB: KEGG
  • Identity: 35.2
  • Coverage: 165.0
  • Bit_score: 92
  • Evalue 1.30e-16

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Taxonomy

Pseudomonas mandelii → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 636
TTCCGTAGCATGCCCAGCATGCTCACTAAACTCGCCCTCGCCATCTCTCTTGCGACCGCGTGTTTCTGTGTTTCCGCCCAATCGGTGACGCAGGATGCGCCCGCCCCGACGGCCAACGCCGTTCCCACCAAGCCATCGACTGCGAAGGGCCAGCATGGCTGGTTCTGGTACGACGATCCCGCTGAGGCTGCCACCACCCCGCCACCACCACCGCCGCCAGTGGGGAGAACATCGGCCGAGCCCACCGCCAACCAGCCTGAAATCGGCTCGGTCGCGTGGATTGCCGCGAACATAGACAAGATCCGGAACCGGGCGATCGACAATCCGACGAAGGACAACATCGAGCTGTTCGCCTATGTCCAGAAGCTGATGATGGACAAGTCCGAAGTGTTCGCGAATGCGTATATCACCGACGTGGCCGCCAACCCGGCGCTCGATGAGACGTCCCGCCATCCAGTGTCTGGCTACGCCAACTTCACGGTCAACGAGGCGATCAACAGGAATCGCGACGCGGCGCTATCGAAGATCTCGAAGGGCACAGGGCACGGCCATCTGGTACTTCTTCAAGAGCGACTGCCCGTACTGCCAGCGCCAGTCCGGCCTTCTCCAGAAGATGGCTGCGAAATACGGTTTTGA
PROTEIN sequence
Length: 212
FRSMPSMLTKLALAISLATACFCVSAQSVTQDAPAPTANAVPTKPSTAKGQHGWFWYDDPAEAATTPPPPPPPVGRTSAEPTANQPEIGSVAWIAANIDKIRNRAIDNPTKDNIELFAYVQKLMMDKSEVFANAYITDVAANPALDETSRHPVSGYANFTVNEAINRNRDAALSKISKGTGHGHLVLLQERLPVLPAPVRPSPEDGCEIRF*