ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1215_28

Organism: SCNPILOT_EXPT_750_P_Legionella_40_6_1

near complete RP 51 / 55 BSCG 48 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(27185..28051)

Top 3 Functional Annotations

Value Algorithm Source
NAD-dependent epimerase/dehydratase n=1 Tax=Pseudomonas psychrotolerans L19 RepID=H0JAJ8_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 56.9
  • Coverage: 297.0
  • Bit_score: 342
  • Evalue 5.10e-91
  • rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EHK71615.1}; TaxID=1112217 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas psychrotolerans L19.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.9
  • Coverage: 297.0
  • Bit_score: 342
  • Evalue 7.20e-91
NAD-dependent epimerase/dehydratase similarity KEGG
DB: KEGG
  • Identity: 54.9
  • Coverage: 295.0
  • Bit_score: 312
  • Evalue 1.00e-82
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas psychrotolerans → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 867
ATGCCTACCGCTTTTCTTACTGGTGCCCGAGGTTTTACCGGGCATTACATGCACAATAAATTGCAAGCGCAAGGAGTAACTGTTTACTCATTTGACGGTGATATTACTGAGCGAGAACGAATACAAACTGCTGTAACGCAAGTAAATCCCGATTGGGTTATCCATCTGGCCGCGGTTTCCTTTGTTGGTCATGCTAAGGCGGATGCTTTTTATCAAGTGAATGTCATGGGCACCTTGAATTTGCTTGAGTCTTTAGCTTCCTTACCCAAAAAACCTGAGCGTATTTTAATCGCCAGCAGCGCGAATATTTATGGTACTCCGCAAAAAAAAACCATTAGTGAAGATACATGCCCTGCACCCGTCAATCACTATGGATGCAGTAAATTAGCGATGGAACATATGGTGAGCAACTGGTTTGACGACTTACCCATTATCACCACCCGCCCCCGCCCCTTTAACTACACGGGTCCTGGGCAAGCACTACAATTTTTGATCCCAAAAATTGTAAGCCATTATGCACGTAAAGATCCCCTCATCGAATTAGGAAATTTAGATATTAGTCGCAATTTTTCCGATGTACGCGATGTAGTTGATTGCTATTGGGCATTACTTAACAGCAATGCACGCAGTGTGAAAGTAAACATTTGCAGCAATAAAGCCACCTCACTTCATGAGATTATTCAATTCATGAATAAATTATCCGGATACACTATGGATGTTCGCACCAACCCAGCCTTTGTCCGTGCCAATGAAATTCGCGTTCTTCAAGGAAATAACCACCTGTTGCACTCTTTAATTGGGCATGTGCCAACCATTCCTCTAGAGAAGACCTTAACCGATATGTACCAAGAACTAGCTTACCTCTAG
PROTEIN sequence
Length: 289
MPTAFLTGARGFTGHYMHNKLQAQGVTVYSFDGDITERERIQTAVTQVNPDWVIHLAAVSFVGHAKADAFYQVNVMGTLNLLESLASLPKKPERILIASSANIYGTPQKKTISEDTCPAPVNHYGCSKLAMEHMVSNWFDDLPIITTRPRPFNYTGPGQALQFLIPKIVSHYARKDPLIELGNLDISRNFSDVRDVVDCYWALLNSNARSVKVNICSNKATSLHEIIQFMNKLSGYTMDVRTNPAFVRANEIRVLQGNNHLLHSLIGHVPTIPLEKTLTDMYQELAYL*