ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1215_29

Organism: SCNPILOT_EXPT_750_P_Legionella_40_6_1

near complete RP 51 / 55 BSCG 48 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(28068..29102)

Top 3 Functional Annotations

Value Algorithm Source
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1619948 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 21.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.3
  • Coverage: 342.0
  • Bit_score: 572
  • Evalue 5.10e-160
GDP-mannose 4,6-dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 344.0
  • Bit_score: 564
  • Evalue 2.40e-158
  • rbh
GDP-mannose 4,6-dehydratase n=1 Tax=Marinobacterium rhizophilum RepID=UPI0003717915 similarity UNIREF
DB: UNIREF100
  • Identity: 79.9
  • Coverage: 344.0
  • Bit_score: 572
  • Evalue 2.80e-160
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas sp. 21 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1035
GTGAAAAAAGCGATTGTAACTGGGATTACGGGACAAGACGGCGCATACCTTGCCGAACTCTTGCTGAAAAAAAATTATCAAGTCTTTGGTACCTATCGCCGCTCCAGTTCTGTAAATTTTTGGCGGATTGAAGAATTAGGAATTCATGAGCACCCAAATCTGCATTTGGTAGAATACGATTTAACTGATTTGTCAGCAAGTATCCGACTTTTACAAAATTCTCAAGCTACTGAAGTATATAACCTTGCGGCACAAAGTTTTGTCGGTGTTTCATTCGAACAACCATTGACCACTTCCAAAATTACCGGTTTAGGTATCGTCAATCTTTTGGAGGCAATCCGCACGGTCAATCCGGAAATCCGTTTATACCAAGCCTCTACTTCAGAAATGTTTGGTAAGGTCCAGGCTATTCCCCAGACTGAAGATACCCCTTTTTACCCACGCAGTCCTTATGGTGTCGCAAAACTTTTTGCTCACTGGATGACGGTTAATTATCGTGAATCCTATAATTTATTTGCTTGTAGTGGTATTTTATTTAACCATGAGTCCCCGCTCCGTGGTCGTGAGTTTGTCACTCGAAAAATTACCGATGCCGTTGCAAAAATCAAATTAGGTAAGCAAAAAGTGCTCGAGCTTGGTAATTTGGACGCCAAGCGCGATTGGGGATTTGCTCGTGAGTATGTTGAAGGTATGTGGCGTATGCTGCAGGCAGATATACCGGACACTTATGTTTTAGCCACTAATCGCACCGAAACAGTACGCCATTTTGTCACCTTAGCTTTTAAAGCAATTGATGTCGATATTGCCTGGCATGGTGAACATGAGAATGAAGAAGGAATCGATCAACGAACCAATGAGACATTGGTAAAAATTTCACCTAAATTTTATCGTCCAGCCGAAGTGGATTTACTCATCGGCGACCCGAGTAAAGCGGAGCAAAATCTGGGATGGAAAGCAACGACTACACTTGAAGAACTATGCCACATGATGGTTATGGCCGATATTCGTCGTAACGAGCTAGGCTTTTCTTTTTAA
PROTEIN sequence
Length: 345
VKKAIVTGITGQDGAYLAELLLKKNYQVFGTYRRSSSVNFWRIEELGIHEHPNLHLVEYDLTDLSASIRLLQNSQATEVYNLAAQSFVGVSFEQPLTTSKITGLGIVNLLEAIRTVNPEIRLYQASTSEMFGKVQAIPQTEDTPFYPRSPYGVAKLFAHWMTVNYRESYNLFACSGILFNHESPLRGREFVTRKITDAVAKIKLGKQKVLELGNLDAKRDWGFAREYVEGMWRMLQADIPDTYVLATNRTETVRHFVTLAFKAIDVDIAWHGEHENEEGIDQRTNETLVKISPKFYRPAEVDLLIGDPSKAEQNLGWKATTTLEELCHMMVMADIRRNELGFSF*