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SCNpilot_expt_1000_bf_scaffold_2143_3

Organism: SCNPILOT_EXPT_750_P_Legionella_40_6_1

near complete RP 51 / 55 BSCG 48 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 888..1880

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1212491 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella fallonii LLAP-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 330.0
  • Bit_score: 618
  • Evalue 7.80e-174
rpoA; DNA-directed RNA polymerase alpha chain; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 92.4
  • Coverage: 330.0
  • Bit_score: 606
  • Evalue 5.30e-171
  • rbh
DNA-directed RNA polymerase subunit alpha n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C78BC similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 330.0
  • Bit_score: 614
  • Evalue 8.00e-173
  • rbh

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Taxonomy

Legionella fallonii → Legionella → Legionellales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 993
ATGTATACTGAAATCAATGAAATGCTGACACCCAGCGTGCTTAAGGTGCAAGCGGAATCTCCATATAAGGCGAGAATCGTTCTTGAGCCCCTTGAGCGCGGATTTGGCCATACTCTTGGTAATGCTTTGAGACGCATATTACTGTCATCTATGCCAGGAAGTGCTATCACTGAAGCTTCTATCGATGGTGTTTTACATGAATACAGCACTATTGAAGGTGTACAGGAAGATGTTGTAGATCTGTTACTTAATCTAAAATTAGTAGCCGTTAAGATGACTGTTGGTGAAGAAGCTTTGCTTACAATAAATAAGCAAGGTCCTTGCCAAGTAACTGCGGGTGATATTCAACTAACTCACGGAGTTGAGGTAGTAAACCCCGAACTAGTTATTGCTCATCTGAATGAAAAAGGCAAATTGAATATGACTCTAAAAGTCGAACGAGGGGTAGGTTTTCATAATACTGACTCCTTTATTCGCCATTTGGATGATGAGGTAGAAAGTAGATCGGTTGGAAAACTTAAAATCGATAACAGCTTTTCACCTGTTATAAAAGTAGCATATTTTGTAGATAGTGCACGCGTTGAAAATCGCACAGATTTAGACAAGCTAACTATCGAATTAGAAACCAATGGAACAATTGATTCTGAAGAGGCTATTCGTATTTCAGCAAGTATTTTGCAACGTCAATTGCATGCATTTGTTGATATGAAATTCGAAGAGTCGCGAGCAGATAATAAAGAGCGTAATGATTTTGATCCAATATTATTGCGTTCTGTTGATGATTTAGAATTAACTGTTCGCTCTGCAAATTGTTTAAAAGCAGAAAATATTCACTATATTGGCGATCTAGTACAACGTACTGAAAATGAGCTGTTGAAGACACCTAATTTGGGCAAAAAATCTTTAACAGAAATAAAAGATGTTTTAGCATCGCGCTCATTATCGCTTGGTATGAAGCTTGAAAATTGGCCGCCAGCAAACCTTGGCGAGTAA
PROTEIN sequence
Length: 331
MYTEINEMLTPSVLKVQAESPYKARIVLEPLERGFGHTLGNALRRILLSSMPGSAITEASIDGVLHEYSTIEGVQEDVVDLLLNLKLVAVKMTVGEEALLTINKQGPCQVTAGDIQLTHGVEVVNPELVIAHLNEKGKLNMTLKVERGVGFHNTDSFIRHLDDEVESRSVGKLKIDNSFSPVIKVAYFVDSARVENRTDLDKLTIELETNGTIDSEEAIRISASILQRQLHAFVDMKFEESRADNKERNDFDPILLRSVDDLELTVRSANCLKAENIHYIGDLVQRTENELLKTPNLGKKSLTEIKDVLASRSLSLGMKLENWPPANLGE*