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SCNpilot_expt_1000_bf_scaffold_1362_25

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial

near complete RP 43 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 9 / 38
Location: 24794..26161

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF3C1E related cluster n=1 Tax=unknown RepID=UPI0003CF3C1E similarity UNIREF
DB: UNIREF100
  • Identity: 67.6
  • Coverage: 463.0
  • Bit_score: 592
  • Evalue 4.50e-166
Transporter {ECO:0000313|EMBL:ESW86069.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.6
  • Coverage: 463.0
  • Bit_score: 592
  • Evalue 6.30e-166
type I secretion outer membrane protein, TolC family; K12340 outer membrane channel protein similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 462.0
  • Bit_score: 578
  • Evalue 1.60e-162

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Taxonomy

Mesorhizobium sp. LSJC280B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1368
GTGTCTCCAGTCCGTAAGGGTCTCGTGGGAGTTCTGGCGCTTTCGGCCGTACTCGTGGCCGCACCCGCCTCCGCCGAAACCATCCTCGGCGCTCTGGCAAAGGCCTATACCAACAATTCGAGCCTGAACTCGGCCCGCGCCGGCGTGCGCGTCACCGACGAGGGCGTCGCGATCGCCAAGTCGGGCTACCGGCCGACGCTGGCCGGCACGTCGAGCTGGAACTACGCCAATGGCGGCGGCGTTTCGCTGACCACCGGCTCGTTCGGCATCCAGCTCAGCCAGACGATCTTCGACGGGCTGCAGACCAAGAACAACGTGCTGGCCGCGGAGGCGCGCGTGGCGGCCGCCGCGGAATCGCTGCGCAACACCGAGCAGAACACGCTGTTCGACGCGGCCTCCGCCTACATGGACGTGATCCGCGACCGCGAGATCGCGACGCTGCGCGAGCGCAACCTCGAATTCCTCGGCGAGCAGGTGCGCGCCGCCAATTCGCGGCTCGAGGTCGGCGAGGGCACCCGCACCGACGTCGCCCAGGCACGCGCCAGCCAGCAGGGGGCGATCGCCCAGCTCAGCGCGGCGCGCGCGCAGGTGCTGGCGAGCTCGGCCACCTACAAGCAGATCGTCGGCGAGGATCCGGGTAAGCTGCAGGCCGGCTCGCCGCTCGGCAAGCTGATCCCCGGCGGCATCCAGGACGGCTTCGCCATCGCGCTGCGGGAGCACCCGGCCATCATCGCCTCCGAGCATCTGGTCGACGCGGCCGGCTTCGTCGTGAAGTCGGCCGAAGGCGGGCTGCTGCCCAAGGTGACGGCGGGCGCCAGCGTCACCAGCAGCTTCCGCGACTCGAACGCGGCCACGGTCGCCAATCCCAACGGCTGGTCGACCTCGGCCGGCATCGGCGCGACGCTGTCCGTGCCGATCTACCAGGGCGGCCGGGTCTCCGCGACGGTGCGGCAGGGCAAGGAATCGCTCGGGCAGGCGCGCATCGACGCCGACGTGAACCGCGACCGGGTCCGCCAGGCGGTCGCCGCCGCATGGGCGCAGTACCAGGCCGCCCAGGAAACGGTGTCGGCCAACCGCGAGCTCGTCTCGGCCGCGCAGCTCGCGCTCAACGGCGTGATCGAGGAGCGCAATGTCGGCCAGCGCACCACGCTCGAGGTGCTCAACGCGCAGGCCGACGTGACCGCGGCGCAGATCAACCTCGTCAGCGCCCAGCGCGACGTGGTGGTGGCGAGCTATGCCATCCTGTCGGCGATCGGCCGGCTGTCGGCGTCGCGGCTGGGCCTCAACGTGGCGCTCTACAAGCCGGAAGAGCACTACGAGGCCGTCAAGGACAAGTGGATGGGCCTGCGCACGCCGGACGGCCGCTGA
PROTEIN sequence
Length: 456
VSPVRKGLVGVLALSAVLVAAPASAETILGALAKAYTNNSSLNSARAGVRVTDEGVAIAKSGYRPTLAGTSSWNYANGGGVSLTTGSFGIQLSQTIFDGLQTKNNVLAAEARVAAAAESLRNTEQNTLFDAASAYMDVIRDREIATLRERNLEFLGEQVRAANSRLEVGEGTRTDVAQARASQQGAIAQLSAARAQVLASSATYKQIVGEDPGKLQAGSPLGKLIPGGIQDGFAIALREHPAIIASEHLVDAAGFVVKSAEGGLLPKVTAGASVTSSFRDSNAATVANPNGWSTSAGIGATLSVPIYQGGRVSATVRQGKESLGQARIDADVNRDRVRQAVAAAWAQYQAAQETVSANRELVSAAQLALNGVIEERNVGQRTTLEVLNAQADVTAAQINLVSAQRDVVVASYAILSAIGRLSASRLGLNVALYKPEEHYEAVKDKWMGLRTPDGR*