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SCNpilot_expt_1000_bf_scaffold_1362_29

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial

near complete RP 43 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 9 / 38
Location: 27730..30639

Top 3 Functional Annotations

Value Algorithm Source
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 975.0
  • Bit_score: 1577
  • Evalue 0.0
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] similarity KEGG
DB: KEGG
  • Identity: 71.8
  • Coverage: 970.0
  • Bit_score: 1387
  • Evalue 0.0
Valine--tRNA ligase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQS0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 975.0
  • Bit_score: 1577
  • Evalue 0.0

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2910
ATGCTCGACAAGACCTACGACGCCGCCGCCGTCGAACCCAAGATCGCCCAGCGCTGGGAGGAGGCTGACGCCTTCCGGGCCGGTGCGGGTGCCAAGCCGGGCGCGGAAGCCTTCACCATCGTCATCCCGCCGCCGAACGTCACCGGCTCGCTGCACATGGGGCACGCGCTCAACGACACGCTGCAGGACATCCTCGTCCGCTTCGAGCGCATGCGCGGCAAGAACGTGCTGTGGCAGCCGGGCATGGACCATGCCGGCATCGCCACGCAGATGGTGGTCGAGCGCCAGCTCGCGCAGAGCGGCATCAGCCGCCGCGACCTCGGCCGCGAGGAGTTCATCGACCGGGTGTGGACCTGGAAGGCGCAGTCGGGCGGCTCGATCATCCACCAGCTCAAGCGGCTCGGCGCGTCGGCCGACTGGAGCCGCGAGCGCTTCACCATGGACGAGGGCCTGTCCGAAGCCGTCCTCGAAGTGTTCGTGACGCTTTATGAGGAAGGGCTGATCTACCGCGGCAAGCGGCTGGTGAACTGGGACCCGGTGTTCGAGACGGCGATCTCCGACCTCGAGGTCGAGAACAAGGAAGCCGCCGGCCACATGTGGCACTTCAAATACCCGCTCGCCGGCGGGGAGACCTACACCTATGTCGAGAAGGACGCCAACGGCAAAATCCTCTTCCAGGAGGAGCGCAACTACATCTCGATCGCCACGACGCGCCCCGAGACGATGCTCGGCGACGGCGCGGTGGCCGTGCACCCGTCGGATTCGCGCTACGCGCCGATCGTCGGCAAGCTGTGCGAGATCCCGGTCGGACCGAAAGAGCACCGGCGGCTGATCCCGATCATCGCCGACGAGTATCCGGATCCGACCTTCGGCTCCGGCGCGGTCAAGATCACCGGCGCGCACGACTTCAACGACTACCAGGTCGCGCGGCGCAACGACATCCCGCTCTACCGGCTTATGGACACCCGCGCGACGATGCGCGAGGACGGCGAGCCCTATGCGGTCTATGCCGCGCGGGCGCTGGAGATCGCGAAGTCGGGCGAGCTGCCGTCCGAGTCCGAGGTCGACCAGATCAACCTCGTGCCGGACGAGTATCGCGGCCTCGACCGCTACGAGGCGCGCAAGCGCATCGTCGAGGCGATCACGGCCGAGGGCCTCGCCGTCACGGTGAAGAACGCCGAGGGCGAGGACGTCCCGCTCGTCGAGGCCAAGAAGATCATGCAGCCCTTCGGCGACCGCTCCGGCGTCGTCATCGAGCCGATGCTGACGGACCAGTGGTTCGCCGACGCCGCGACGCTGGCCAAGCCCGCGATCGACAGCGTGCGTCAGGGCCGCACGAAGTTCGTCCCGAAGAACTGGGAGAAGACCTATTTCGACTGGATGGAGAACATCCAGCCCTGGTGCATCTCGCGCCAGCTCTGGTGGGGCCACCAGATCCCGGCCTGGTACGGGCCGGACGGCCACGTCTTCGTCGCCCGCACCGAGAAGCAGGCGCTCGACGACGCGGTCGAGTACTATCTCGCGCTCGAAGGGCCGTGGAAGGCCTGGGTCGAGGAGAAGCTGGAGAACTTCGACCCCGGCGCGATCCTGACCCGCGACGAGGACGTGCTCGACACCTGGTTCTCGTCGGCGCTGTGGCCGTTCTCCACCCTCGGCTGGCCGCGCGAGACGCCGGAGCTGAAGACCTACTACCAGACCGATGTGCTGGTGACCGGCTTCGACATCATCTTCTTCTGGGTCGCCCGGATGATGATGATGGGCCTGCATTTCATGGACGAGGAGCCGTTCCACACGGTCTACGAGCATGAGCTCGTTCGCGACAAGAACGGGCAGAAGATGTCGAAGTCGAAGGGCAACGTCATCGACCCGCTCGACCTGATCAGCGAGTACGGCGCCGACGCGCTGCGCTTCACGCTGGCGATCATGGCCGCGCAGGGCAGGGACGTGAAGCTCGATCCGGCGCGCATCGCCGGTTACCGCAACTTCGGCACCAAGCTGTGGAACGCCACGCGCTTCGCCGAGATGAACGGGGCCGAGCGGCACGAGGGCTTCGACCCGGACGGCGTCCGGCTCACCGTCAACCGCTGGATCCTGACCGAGCTGACCAAAGCCGCGCGCGAGGTGACGGACGGCATCACCTCCTACCGCTTCAACGAGGCGGCGGGCGCGGCCTACCGCTTCGTCTGGAACCTGTTCTGCGACTGGTATGTCGAGCTCCTGAAGCCGGTGTTCTCCGGCGACGACGAGGCGGCGATGGCCGAGAGCCGGGCGACGATGGCCCATGTGCTTGACCGCATCTACGAGCTGCTGCACCCGTTCATGCCGTTCATGACGGAGGAGCTGTGGGCGCAGACCTCGTCCTGGGGCCAGCCGCGCGGCGGCCTGCTGTGCCACGCCGAGTGGCCGGCGCCCGATTTCGAGGACACGGACGCGGCGGCCGAGATCAACTGGCTTGTCGATCTCGTCTCCGGCATCCGCTCCGTGCGCTCGGAGATGAACGTGCCGCCGGCGGCGATCGCGCCGCTGGTGTTCGTGGGCGCTGCGGCCGCCACCCGCGAGCGCGCGGCGCGGCATGACCCGGCGATCCGGCGTCTGGCGCGGGTCGGCGAGGTCGGCTTCGCGGACGCCGCGCCGAAGGGTTCGGCGCAGGTCGTGCTCGGCGAGGCCACCGCCTGCCTGCCGCTCGGCGAACTGATCGACCTCAAGGCCGAGACCGCGCGGCTGACCAAGGAGTTGGCGAAGAACGCCGACGAGATCGCGCGCATCGAGAAAAAGCTCGGCAACCCGCAATTCGTCGCCAAGGCCGCTCCCGAGGTGGTCGAGGCCGAGCGCGAGAAGCAGGCCGAGTTCGAGGAGGCCCGCCACCGGCTCGAAACGGCGCTCGCGCGGGTGCGCGACGCGGCGGATTAG
PROTEIN sequence
Length: 970
MLDKTYDAAAVEPKIAQRWEEADAFRAGAGAKPGAEAFTIVIPPPNVTGSLHMGHALNDTLQDILVRFERMRGKNVLWQPGMDHAGIATQMVVERQLAQSGISRRDLGREEFIDRVWTWKAQSGGSIIHQLKRLGASADWSRERFTMDEGLSEAVLEVFVTLYEEGLIYRGKRLVNWDPVFETAISDLEVENKEAAGHMWHFKYPLAGGETYTYVEKDANGKILFQEERNYISIATTRPETMLGDGAVAVHPSDSRYAPIVGKLCEIPVGPKEHRRLIPIIADEYPDPTFGSGAVKITGAHDFNDYQVARRNDIPLYRLMDTRATMREDGEPYAVYAARALEIAKSGELPSESEVDQINLVPDEYRGLDRYEARKRIVEAITAEGLAVTVKNAEGEDVPLVEAKKIMQPFGDRSGVVIEPMLTDQWFADAATLAKPAIDSVRQGRTKFVPKNWEKTYFDWMENIQPWCISRQLWWGHQIPAWYGPDGHVFVARTEKQALDDAVEYYLALEGPWKAWVEEKLENFDPGAILTRDEDVLDTWFSSALWPFSTLGWPRETPELKTYYQTDVLVTGFDIIFFWVARMMMMGLHFMDEEPFHTVYEHELVRDKNGQKMSKSKGNVIDPLDLISEYGADALRFTLAIMAAQGRDVKLDPARIAGYRNFGTKLWNATRFAEMNGAERHEGFDPDGVRLTVNRWILTELTKAAREVTDGITSYRFNEAAGAAYRFVWNLFCDWYVELLKPVFSGDDEAAMAESRATMAHVLDRIYELLHPFMPFMTEELWAQTSSWGQPRGGLLCHAEWPAPDFEDTDAAAEINWLVDLVSGIRSVRSEMNVPPAAIAPLVFVGAAAATRERAARHDPAIRRLARVGEVGFADAAPKGSAQVVLGEATACLPLGELIDLKAETARLTKELAKNADEIARIEKKLGNPQFVAKAAPEVVEAEREKQAEFEEARHRLETALARVRDAAD*