ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1857_8

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial

near complete RP 43 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 9 / 38
Location: comp(5705..7588)

Top 3 Functional Annotations

Value Algorithm Source
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.5
  • Coverage: 547.0
  • Bit_score: 884
  • Evalue 8.50e-254
glyS; glycyl-tRNA synthetase subunit beta; K01879 glycyl-tRNA synthetase beta chain [EC:6.1.1.14] similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 561.0
  • Bit_score: 866
  • Evalue 7.00e-249
Glycine--tRNA ligase beta subunit n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y956_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 78.1
  • Coverage: 566.0
  • Bit_score: 876
  • Evalue 2.10e-251

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Aquamicrobium defluvii → Aquamicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1884
ATGCCCGACCTTCTTCTTGAACTCCGCTCCGAGGAAATCCCCGCCCGCATGCAGCGCAAGGCGGCGGTCGATCTCAAGAAGATGGTGACGGATGGTCTGGTCGAGGCCGGGCTGACCTACGAGGCGGCGACGGAATACTGGACGCCGCGCCGGCTGGCGCTCGACGTGCGCGGTCTGACGGCGCGCTCGCGCGACGTGCGCGAGGAGCGCAAGGGCCCCTCGACCAAGGCGCCCGAGCAGGCGATCCAGGGCTTTCTCCGCTCCGCCGGCCTGTCCGACGTCTCGCAGGCGAAGGTCCAGTCGGACCCGAAGAAGGGCGATTTCTACGTCGCGGTGATCGAGAAGCCGGGCAGGGTCGCCGAGGAGATCGTCGCCGAGGTGGTGCCGGCCGCGATCCGCGCCTTCCCGTGGCCGAAGTCGATGCGCTGGGGCGCGGCCTCCGGCCCGAAGGGCTACAGCTATGGCGGGATCGAGGGAAGGGGGGCCGAGGCGCTGCGCTGGGTGCGGCCGCTGCAATCGATCCTGTGCACCTTCGGCCCCGAGACCGAGGAGACCAGGGTCGTCGACTTCGAGGTCGACGGCATCCGCTCCGGCAACCTCACCTGGGGCCACCGCTTCCACGCGCCGGCCGCGATCGAGGTCAAGCGCTTCGAGGACTACGTCGCGAAGCTGGAAGCGGCGAAGGTCGTGCTCGACGCCGAGCGCCGCAAGGCGATCATCCTGACCGAAGCCCGCAACCAGGCCTTCGCCAGCGGGCTGGAGCTGGTCGAGGACGACGGGCTGCTGGAGGAGGTCTCCGGGCTGGTCGAGTGGCCGGTCGTTCTGCTCGGCGAGTTCGAGAAGGAGTTCCTCGACATCCCCGCCGAGGTCATCCGGCTCACCATCCGCGCCAACCAGAAATGCTTCGTCGCGCGTCCGGCCGGCGAGGCTGAGAAGCTCGCCAACCGCTTCGTGCTCACCGCCAACATCGAGGCGAAGGACGGAGGGGCGGAGATCGCCTACGGCAACGGCAAGGTGGTCCGCGCGCGCCTGTCGGACGCCGTGCACTTCTGGAAGACCGACCAGGCCGACCTGCCGGACCTTGGCAGGCTGGAGGCGGCGGCGCAGAAATTCGGCCTCGGTCTGGCAAAGCCGCTCGACCAGCGCATGGCCCGCCTCGATCATCTCGGCGTCACCTTCCACGCCAAGCTGGGAACGCAGGGCGAGCGCGTCGAGCGCATCGCGCGGCTGGCGGAGGAACTGGCTACCGTCGTCGGCGCGGACCCGCGGCTTGCCCGCCGCGCGGCCGTGCTCGCCAAGGCCGATCTGCAGACCGAGGTCGTCGGCGAGTTCCCCGAGCTGCAGGGCGCGATGGGGCGCAAATATGCCGCGTTGCAGGGCGAGGCCCCGGCCGTCGCGGCGGCCGTCGAGGAGCACTACAGGCCGCAGGGCCCGAGCGACCATGTGCCGTCGGAGCCGGTGTCGATCGCCGTCGCGCTTGCCGACAAGCTCGACACGCTGGTCGGCTTCTGGGCGATCGACGAGAAGCCGACGGGGAGCAAGGATCCCTACGCCCTGAGGCGGGCGGCGCTCGGCGTCATCAGGATCGTGGTCGAGAACGGAGTGCGGCTGGGGCTGCTCAGGACCGCATCCGCCGCCTATCGGTCGTCGCTCGAGGACCTGTGCGACGATCCCTCTTATCTGGTGAGCAGCGACGGCGTCAGGGCTTCCGAGTTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGAGACGGCGATCTGGCGGCTGGAGCCGGGCGGGTCCGCTTCGGGCATGGAGCTGGTCGAGCAGTTCCCGAGCCCGGCCGCGCTGGGCCGCGACCTCCTCTCCTTCTTCCACGACCGCCTGA
PROTEIN sequence
Length: 628
MPDLLLELRSEEIPARMQRKAAVDLKKMVTDGLVEAGLTYEAATEYWTPRRLALDVRGLTARSRDVREERKGPSTKAPEQAIQGFLRSAGLSDVSQAKVQSDPKKGDFYVAVIEKPGRVAEEIVAEVVPAAIRAFPWPKSMRWGAASGPKGYSYGGIEGRGAEALRWVRPLQSILCTFGPETEETRVVDFEVDGIRSGNLTWGHRFHAPAAIEVKRFEDYVAKLEAAKVVLDAERRKAIILTEARNQAFASGLELVEDDGLLEEVSGLVEWPVVLLGEFEKEFLDIPAEVIRLTIRANQKCFVARPAGEAEKLANRFVLTANIEAKDGGAEIAYGNGKVVRARLSDAVHFWKTDQADLPDLGRLEAAAQKFGLGLAKPLDQRMARLDHLGVTFHAKLGTQGERVERIARLAEELATVVGADPRLARRAAVLAKADLQTEVVGEFPELQGAMGRKYAALQGEAPAVAAAVEEHYRPQGPSDHVPSEPVSIAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRIVVENGVRLGLLRTASAAYRSSLEDLCDDPSYLVSSDGVRASEFXXXXXXXXXXXXXXXXRRRSGGWSRAGPLRAWSWSSSSRARPRWAATSSPSSTTA*