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SCNpilot_expt_1000_bf_scaffold_2184_27

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial

near complete RP 43 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 9 / 38
Location: comp(22041..22790)

Top 3 Functional Annotations

Value Algorithm Source
Putative mandelate racemase/muconate-lactonizing protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XLV1_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 55.3
  • Coverage: 103.0
  • Bit_score: 115
  • Evalue 8.80e-23
putative mandelate racemase/muconate-lactonizing protein similarity KEGG
DB: KEGG
  • Identity: 55.3
  • Coverage: 103.0
  • Bit_score: 115
  • Evalue 2.80e-23
Putative mandelate racemase/muconate-lactonizing protein {ECO:0000313|EMBL:AGU53080.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.3
  • Coverage: 103.0
  • Bit_score: 115
  • Evalue 1.20e-22

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGCGCGGATCGGCATTCGACTTCAGGGTTGACGCGTTCGCGGTCGCCGTCCTGCGCGCGCCGATCGCGACGCCGGTGAAGACCTCCTTCGGGGTGATGAGGGACAGGCCGGCCGTGTTCCTGCGCGTCACCGACGAAGCGGGGCGGCACGGCTACGGGGAAGTGTGGTGCAACTTTCCGACGGTGGCGGCCGAGCACCGGGCGCGGCTCGCGCAGGAGGTGGTCGGGCCGCTGCTGCGGACGCTGCTGCCGGACGCCGAAGGCCGGATCTACGCGCGGCTGATGGAGCGCCTGCACGTGCTCGCCCTCCAGAGCGGCGAATGGGGGCCGCTGCGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTCGCCGCCCGCCGCGCCGGCCTTCCTCTCTACCGCTTTCTGGACGGCGAAGGCGCCCGCTCGCGGATCGGGGCCTATGCCAGCGGCATCGGCCCGGAGACGCCGGGCGCGACCGCGAAGGCCGCGGCGGCGGCCGGCCACGCCGCCTTCAAGGTCAAGGTCGGCTTCGGCCGCGACACCGACCTCGCCTCGCTGGAGGCGATGCGCGCCGCGATCGGCGCGGGCGGGACGCTGATGGCGGACGCCAACCAGGGCTGGGCGCTCGACGAGGCGCTGGCCCGCAGCGCCGAATATGCCGCCTTCGATCTGCGCTGGCTGGAGGAGCCGCTGCGCGCCGACCGGCCGNNNNNNGACCGACGACTTCGAGGCGATGA
PROTEIN sequence
Length: 250
MRGSAFDFRVDAFAVAVLRAPIATPVKTSFGVMRDRPAVFLRVTDEAGRHGYGEVWCNFPTVAAEHRARLAQEVVGPLLRTLLPDAEGRIYARLMERLHVLALQSGEWGPLRXXXXXXXXXXXXXPRRPPRRPSSLPLSGRRRRPLADRGLCQRHRPGDAGRDREGRGGGRPRRLQGQGRLRPRHRPRLAGGDARRDRRGRDADGGRQPGLGARRGAGPQRRICRLRSALAGGAAARRPAXXXPTTSRR*