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SCNpilot_expt_1000_bf_scaffold_2189_13

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial

near complete RP 43 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 9 / 38
Location: 8140..8568

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.2
  • Coverage: 142.0
  • Bit_score: 171
  • Evalue 1.10e-39
UPI0003D03FCF related cluster n=1 Tax=unknown RepID=UPI0003D03FCF similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 143.0
  • Bit_score: 167
  • Evalue 8.60e-39
PilT protein domain-containing protein; K07062 similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 142.0
  • Bit_score: 165
  • Evalue 1.70e-38

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Taxonomy

Pseudomonas bauzanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 429
ATGTTCCTTCTGGACACGAACGTCGTTTCGGCGCTCGCGCCGCATAATGTCGACCGCCATCCGGAACTGGTTGCCTGGATGCGCCGGAACGATCGGCTGCTTCGACTGTCGGTGGTCACCGCCTCGGAGGTGGAAGCCGGCATAGCCAAGGCTGTGAGGACGGGCGCGCGCGCCAAGTCGGCAAGTCTGCGCAAATGGTGGGCTGGTCTTGTCGAGCTTTACGACGACAGGATCCTGCAAGTCGATCTCCGGATCGCGGAAGCTGCCGGGCAGATGCTCGATGAGGCGCGCGCGCACGATCCAGGCTACGAGGACATCCTCATCGCTGCCACGGCCAGGGTCCACGGCATGACAGTGCTCACCCGCAACGAGCGGCATTTCGCTCCGCTCGGCGTGGACGTCGTCGATCCCTTCGTCCGGCTTCCCTGA
PROTEIN sequence
Length: 143
MFLLDTNVVSALAPHNVDRHPELVAWMRRNDRLLRLSVVTASEVEAGIAKAVRTGARAKSASLRKWWAGLVELYDDRILQVDLRIAEAAGQMLDEARAHDPGYEDILIAATARVHGMTVLTRNERHFAPLGVDVVDPFVRLP*