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SCNpilot_expt_1000_bf_scaffold_2189_17

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial

near complete RP 43 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 9 / 38
Location: 11383..11784

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 133.0
  • Bit_score: 154
  • Evalue 9.90e-35
Ribonuclease VapC n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FMF9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 60.2
  • Coverage: 133.0
  • Bit_score: 154
  • Evalue 7.00e-35
putative pilT protein, N-terminal, putative toxin of TAS system similarity KEGG
DB: KEGG
  • Identity: 46.6
  • Coverage: 133.0
  • Bit_score: 123
  • Evalue 7.10e-26

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Taxonomy

Mesorhizobium sp. STM 4661 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 402
TTGGTTATCGACACCTCCGCGCTTGTCGCCATCCTCAAGCAAGAGCCTGAAGCACCTGAAATAGTTGCTTGCCTTGGGAGAGCTGAACGGAGATTGCTGAGCGCCGGCACTGCGTTGGAATGCGGCATCGTGGTTGCATCGAAATTCGGCCCGCTTGGCCGCGAGCGCCTTTTGCAATTGATCCATCTCTCCCGCATCGAAATCGTCCCTTTCGATGAAGCGCAGGTACGCATCGGCATTGACGCTCGCTTTCGCTACGGCCGCGGTTCCGGGGATTCCGCCAAGCTCAACTTCGGCGACTGCTTCGCCTATGCGCTGGCCAAGACCCGCAACCTGCCGCTGCTTTTCAAGGGCGACGATTTCATCCATACCGACATCGTCCCGGCGCTTCCGCCGGCCTGA
PROTEIN sequence
Length: 134
LVIDTSALVAILKQEPEAPEIVACLGRAERRLLSAGTALECGIVVASKFGPLGRERLLQLIHLSRIEIVPFDEAQVRIGIDARFRYGRGSGDSAKLNFGDCFAYALAKTRNLPLLFKGDDFIHTDIVPALPPA*