ggKbase home page

SCNpilot_expt_1000_bf_scaffold_3880_5

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial

near complete RP 43 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 9 / 38
Location: comp(2453..2887)

Top 3 Functional Annotations

Value Algorithm Source
cytochrome C biogenesis protein CcdA n=1 Tax=Hoeflea sp. 108 RepID=UPI00035D453E similarity UNIREF
DB: UNIREF100
  • Identity: 82.6
  • Coverage: 144.0
  • Bit_score: 241
  • Evalue 4.70e-61
Cytochrome c-type biogenesis protein CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; Cytochrome c maturation protein E {ECO:0000256|HAMAP-Rule:MF_01959}; Heme chaperone CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; TaxID=1287105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C066B000.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 142.0
  • Bit_score: 233
  • Evalue 1.80e-58
cytochrome c-type biogenesis protein CcmE similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 142.0
  • Bit_score: 231
  • Evalue 1.50e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. L2C066B000 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 435
ATGACACGCAAGCAGAAGCGCCTCGCCGTCATCGCCGGCGGCCTCGTCTTCCTCGGCGCCGCGGCTGGCCTCACCTTCTACGCGCTCGGCCAGAAGACCTCCTATTTCTACATGCCCGCCGACCTGCACGCCGCCGTGCTCCAGCCCGGCCAGCGGATCCGTCTCGGCGGCCTCGTCGAAGAGGGCTCCATCGTGCGCGGGCAGGGCACCGAGGTGGCGTTCGCCGTCACCGACACGCAGGACACCGTCAAGGTACGCTATGCCGGCATCCTGCCCGACCTGTTCCGCGAGGGGCAGGGGGTTGTGGCCGAGGGCAGCTTCGCCGGCGACGGCGTCTTCGTCGCCGACAGCGTTCTGGCCAAGCACGACGAGACCTACATGCCGAAGGAAGTGGCCGAGGGTCTGAAGGAAAAGGGCGTATGGCAGCCGGAATGA
PROTEIN sequence
Length: 145
MTRKQKRLAVIAGGLVFLGAAAGLTFYALGQKTSYFYMPADLHAAVLQPGQRIRLGGLVEEGSIVRGQGTEVAFAVTDTQDTVKVRYAGILPDLFREGQGVVAEGSFAGDGVFVADSVLAKHDETYMPKEVAEGLKEKGVWQPE*