ggKbase home page

SCNpilot_expt_1000_bf_scaffold_3880_20

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial

near complete RP 43 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 9 / 38
Location: comp(13941..14279)

Top 3 Functional Annotations

Value Algorithm Source
Gene transfer agent (GTA) like protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A4Z5_STAND similarity UNIREF
DB: UNIREF100
  • Identity: 67.6
  • Coverage: 111.0
  • Bit_score: 136
  • Evalue 1.30e-29
Uncharacterized protein {ECO:0000313|EMBL:EXL10067.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.6
  • Coverage: 112.0
  • Bit_score: 146
  • Evalue 3.00e-32
gene transfer agent (GTA) like protein similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 111.0
  • Bit_score: 136
  • Evalue 4.00e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Aquamicrobium defluvii → Aquamicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 339
ATGGTGGCGAACGCGCGACGCGGCGAGGTGGCCGCCATCCTCGACGGCCGCGAGATGCGGCTGCGCCTGACGCTGGGCGCGCTGGCCGAGCTGGAGGGCGCGTTCGCGGCCGAGGATCTCGGCGCGCTGGTGGCGCGCTTCTCGACGGGCAAGCTCTCCGCCACCGACATGATGCGCATCGTCGGCGCCGGCCTGCGCGGCGCGGGCACGGTGGTGACCGACGAGGAGGTCGGCCGCATGGATTGCGACGACGGGGCGGCGGGCTTTGCCCGCATCGTCTCGGAGCTGCTGGCGCAGACCTTCGGCCGCGCCGGGGAGGGCGCCCCACAAAACCCTTGA
PROTEIN sequence
Length: 113
MVANARRGEVAAILDGREMRLRLTLGALAELEGAFAAEDLGALVARFSTGKLSATDMMRIVGAGLRGAGTVVTDEEVGRMDCDDGAAGFARIVSELLAQTFGRAGEGAPQNP*