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SCNpilot_expt_1000_bf_scaffold_4143_1

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial

near complete RP 43 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 9 / 38
Location: 1..402

Top 3 Functional Annotations

Value Algorithm Source
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 132.0
  • Bit_score: 184
  • Evalue 8.90e-44
hemC; porphobilinogen deaminase; K01749 hydroxymethylbilane synthase [EC:2.5.1.61] similarity KEGG
DB: KEGG
  • Identity: 60.9
  • Coverage: 133.0
  • Bit_score: 166
  • Evalue 4.30e-39
porphobilinogen deaminase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003611284 similarity UNIREF
DB: UNIREF100
  • Identity: 64.7
  • Coverage: 133.0
  • Bit_score: 187
  • Evalue 7.50e-45

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Taxonomy

Pseudomonas bauzanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 402
AGGCGGCTGGCGATGACCGAGGTGGCAACCGAGATCCTGCCGCTCGACCGTTTCCCGCCGGCGCCGGGACAGGGCGCGATCTGTATCGAGGCGCGGAGCGACGAACGCCGGGTGGCGAGCATGCTCGCGCCGCTGATGCACGTGCCGACGGGCCACGCGCTCGCCTGCGAGCGTGCCTTCCTCGCCGCGCTCGACGGCTCCTGCCGCACGCCGATAGCGGGACATGCGCTGGTCGACGGGGACAGGCTCTCCTTCTCCGGCATGATCCTTTCGCCCGATGGCGCCCGGGTCCACGAGATCGCGGCCGAGGGCCGCGCGGCCGACGCCGCGGAGATCGGCGCGCGCGCCGGGGCCGACATACGGGCAAAGGCCGGATCGGCCTTCTTCAAGGACTGGGCGTGA
PROTEIN sequence
Length: 134
RRLAMTEVATEILPLDRFPPAPGQGAICIEARSDERRVASMLAPLMHVPTGHALACERAFLAALDGSCRTPIAGHALVDGDRLSFSGMILSPDGARVHEIAAEGRAADAAEIGARAGADIRAKAGSAFFKDWA*