ggKbase home page

SCNpilot_expt_1000_bf_scaffold_4143_12

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial

near complete RP 43 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 9 / 38
Location: 10653..13802

Top 3 Functional Annotations

Value Algorithm Source
helicase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037B46E0 similarity UNIREF
DB: UNIREF100
  • Identity: 73.0
  • Coverage: 999.99
  • Bit_score: 1502
  • Evalue 0.0
Helicase {ECO:0000313|EMBL:ESY79641.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.3
  • Coverage: 999.99
  • Bit_score: 1468
  • Evalue 0.0
DNA/RNA helicase, superfamily II similarity KEGG
DB: KEGG
  • Identity: 70.4
  • Coverage: 999.99
  • Bit_score: 1467
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. LNHC220B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3150
GTGTCGGGCCGCGACGTGACGGCGGTGCTAGGCCCCACCAACACCGGCAAGACGCATCTCGCCATCGAGCGCATGGTGGCGCACCAGAGCGGGCTGATCGGCCTGCCACTCCGGCTGCTCGCGCGCGAGGTCTATGGCCGCGTGGCCGAGAAGGTCGGGCTCGCCAACGTCGCGCTGGTGACGGGCGAGGAGAAGATCGTGCCGCCCGGCGCCCGCTACACGGTCTCGACCGTCGAGGCGATGCCGCGCCAGACGGACGCCGCCTTCGTTGCCATCGACGAGGTGCAGCTCGCCGCCGATTTCGAGCGCGGCCACATCTTCACCGACCGCATCCTGCACCTGCGCGGCCGGCAGGAGACGCTGCTGCTCGGCGCCGGCACCATGCAGGGCATCCTGCAGAAGCTGCTGCGCGGCCTGTCGGTGGTGACGCGGCCGCGGCTGTCGCATCTGGCCTATGCCGGCTCGAAGAAGCTGACGCGGCTGCCGCGCCGCTCGGCCATCGTCGCCTTCTCGGCCGACGAGGGCTACGCGATCGCCGAGCTGATCCGGCGCCAGCGCGGCGGCGCGGCCGTCGTGCTCGGCGCGCTTTCCCCGCGCACCCGCAACGCGCAGGTCGAGATCTACCAGTCGGGCGACGTCGATTATCTGGTGGCGACCGACGCCATCGGCATGGGCCTCAACCTCGACGTCGACCACGTCGCCTTCGCGCAGAACCGCAAGTTCGACGGCTACCAGTATCGCGAGCTGACGGCGGCCGAGCTCGCCCAGATCGCCGGCCGCGCCGGCCGCCACGTGCGCGACGGCACGTTCGGCGTCACCGGCCAGGTCGACCCGTTCCCCGACGATCTCGTCGAGAAGATCGAGGGCCACGAGTTCGAGCCGGCGAGGGTGCTGCAATGGCGCACGGCCGCGTGCGACTTCGCCGGCATCGAGGCGCTGCGGCGCTCGCTCGACGCGCTGCCGCCGATCGAGGGGCTGACCCGCGCCTTGCCGGCGGCCGACCAGACCGCGCTCGACCTCCTGTCGCGCGAGCCCGACGTCGCGGCGCTGGCCGACCGGCCGGAGCGCGTGGCGCTCCTGTGGGACGCCTGCGCGCTGCCCGACTATCGCCGCATCGCGCCGGCGCAGCATGCCGAGCTGGTCGCGGCAATCTTCCAGGACCTGGCGCGGCGCGGCCATGTCGACGCCGACTACATGGCCCAGCAGGTGCGCCGGGCCGATTCGACCGAGGGCGACATCGACGTGCTGTCGGCGCGCATCGCCCAGATCCGCACCTGGACCTTCGTTTCCCACCGGCCCGGCTGGCTGGCCGATCCAACACACTGGCAGGAAAAAACGCGCGATATCGAGGACCGGCTGTCGGATGCGCTGCATGAGCGATTGACGAAACGCTTCGTGGACCGCAGGACATCCGTGCTGATGAAGCGCCTGAGAGAGAACACCATGCTCGAAGCAGAGATCAGTCCGGCCGGCGAGGTTCTCGTCGAAGGCCATCACGTGGGCGAGCTCCAGGGCTTCCGCTTCACCGTCGACCAGGGTGCGGAGGGCGAGGACGCCAAGGCCGTGCGGGCGGCCGCGCAGAAGGCGCTGGCGCGCGAGTTCGAGGCGCGCGCCGACCGCTTCGCGAACGCGCCGAACGGCGATCTGGCGCTCGGATCGGACGGCATCCTGCGCTGGATCGGCGCGCCCGTGGCGACGCTTGTCGCCGGCGAGGACATGCTCAAGCCCCGGCTCGTTCTGCTCGCCGACGAGCAGCTCACCGGCACGCCGCGGGACCGTGTGGCTGCCCGCGCGGAGCGCTACGTCGCCTTCCAGGTCGAGACGCTGCTGAAGCCGCTGGGCGACCTGTCGACCGCGGAGATCCTGAGCGGCATCGCCAAGGGGATCGCCTTCCGGCTGGTCGAGAATTCCGGGCTGGTCAACCGGCGCGACATCGCCGAGGAGGTGCGCTCGCTCGACCAGGACGCGCGCGCGGCGCTGCGACGGCTCGGCGTGCGCTTCGGCGCCTACCACGTCTTCGTGCCGGCGCTGCTGAAGCCCGCGCCGGCCGGGCTGCTGACGCTGCTGTGGGCGCTGAAGAACGACGCCAAGGACAAGCCGGGCTTCGGCGACGTCGTGCACATGCTGGGTTCGGGCCGCACCTCGCTGGTGGTCGACCCGGCCTTCGAGAAGGCCTTCTACAAGCTTGCCGGCTACCGCAATCTCGGCCGCCGCGCGGTGCGCGTCGACATATTGGAGCGGCTCGCCGACCTGATCCGCCCGGCGCTCGCCTGGAAGGAGAACGAGGGCAAGCGGCCGGAGGGCGGCTATGGCGGCGGCGCCTTCGTGGTGACGCCGGCGATGATGTCCATCCTCGGCGCGACCGCCGAGGACATGGAGGAGATCCTCAAGGGCCTCGGCTATCGCGGCGAGCCGAAGCCGGCGGCGGAAGTCGCCGCCCGGATCGAGAGCCTCGACGCGGCGCAGCGGGCGGCGGAGGCGGCGAAGGCGGAAGCCGCGGCCGCGCAGGACCATGGCGGCGAGATGGCCGACCCGAACGTGCCGGCCACGACCGAGGCGAATGCCGAACCGGTGGCGGGCGAGGCCGCGCTGCCGAACGCCGTCGATGCCGACGCCGACCAGCCGGTCGCCGGACCGGACCTGACCGTCGAGCCGGCGGCGCCGGACGAAGCCAATCTCAGCCATCACGACGTCATGGCCGATCCCAACGTCTCGCCCGCGCCGGCGACCGGGGCGCCGTCGGAGGAGCCGGCCGAGGAGCCGAAGCCGGTGACCGTGTGGCGGCAGGGCCGCTTCGACCGCGGCGGCCGCCCCGGCGAGCGCAACCAGCGGCCCGGCGGCGGCCAGCGCCACGGCGACCGGCGCGGACGCCCCGGCGGCCAGCAGGAGGCCGGCGAGCGCGAGGGCGGCGGACGGCCGCCGCGCCGCTTCGACCGCCACGGGAAGCCGGACGGCAAGCCCGGCGGCCGCGAGGAACGCGGCGAGGGCGGCGGCGAGCAGCGCGGCTTCAAGGGCAAGCGCCCGCCGCGCGAGGGTGGCGGCAAGGACAGGCCGTTCCAGCAGCGGCCGCGCGAGGAGCGTGCGCCCCGGATCGACCCGGACTCGCCCTTCGCCAAGCTCGCCGCGCTGCGCGACCAGCTCAAGAAGTAG
PROTEIN sequence
Length: 1050
VSGRDVTAVLGPTNTGKTHLAIERMVAHQSGLIGLPLRLLAREVYGRVAEKVGLANVALVTGEEKIVPPGARYTVSTVEAMPRQTDAAFVAIDEVQLAADFERGHIFTDRILHLRGRQETLLLGAGTMQGILQKLLRGLSVVTRPRLSHLAYAGSKKLTRLPRRSAIVAFSADEGYAIAELIRRQRGGAAVVLGALSPRTRNAQVEIYQSGDVDYLVATDAIGMGLNLDVDHVAFAQNRKFDGYQYRELTAAELAQIAGRAGRHVRDGTFGVTGQVDPFPDDLVEKIEGHEFEPARVLQWRTAACDFAGIEALRRSLDALPPIEGLTRALPAADQTALDLLSREPDVAALADRPERVALLWDACALPDYRRIAPAQHAELVAAIFQDLARRGHVDADYMAQQVRRADSTEGDIDVLSARIAQIRTWTFVSHRPGWLADPTHWQEKTRDIEDRLSDALHERLTKRFVDRRTSVLMKRLRENTMLEAEISPAGEVLVEGHHVGELQGFRFTVDQGAEGEDAKAVRAAAQKALAREFEARADRFANAPNGDLALGSDGILRWIGAPVATLVAGEDMLKPRLVLLADEQLTGTPRDRVAARAERYVAFQVETLLKPLGDLSTAEILSGIAKGIAFRLVENSGLVNRRDIAEEVRSLDQDARAALRRLGVRFGAYHVFVPALLKPAPAGLLTLLWALKNDAKDKPGFGDVVHMLGSGRTSLVVDPAFEKAFYKLAGYRNLGRRAVRVDILERLADLIRPALAWKENEGKRPEGGYGGGAFVVTPAMMSILGATAEDMEEILKGLGYRGEPKPAAEVAARIESLDAAQRAAEAAKAEAAAAQDHGGEMADPNVPATTEANAEPVAGEAALPNAVDADADQPVAGPDLTVEPAAPDEANLSHHDVMADPNVSPAPATGAPSEEPAEEPKPVTVWRQGRFDRGGRPGERNQRPGGGQRHGDRRGRPGGQQEAGEREGGGRPPRRFDRHGKPDGKPGGREERGEGGGEQRGFKGKRPPREGGGKDRPFQQRPREERAPRIDPDSPFAKLAALRDQLKK*