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SCNpilot_expt_1000_bf_scaffold_3604_10

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial

near complete RP 43 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 9 / 38
Location: 8120..8458

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D3W9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 109.0
  • Bit_score: 165
  • Evalue 3.40e-38
Uncharacterized protein {ECO:0000313|EMBL:CDM60983.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.3
  • Coverage: 109.0
  • Bit_score: 171
  • Evalue 6.60e-40
cupin 2 barrel-domain containing protein similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 112.0
  • Bit_score: 119
  • Evalue 5.10e-25

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Taxonomy

Rhizobium sp. LPU83 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 339
ATGCAGGTCACCCGCATCGCCGAGGCGCGCGCCTACGAGGCGGCGGAGCATTTCGACATGCGCTGCCTGCGCCTGCAGGGCAAGGAGGCGACGCAAACCGACAGCGTGTGGGTCGGGCTGTCGCACCTGCTGCCTGGCGGCCACACCTCGATGCGCGACGCGGCGGTGGAAAAGATCTATGTCGTGATCGCCGGCGAGGTGACGGTGCGCACGCCGGACGAGTGCGTGAGGCTCGGCCCGCTCGACAGTTGCCGGCTGGCGGCCGGCGAGCCGCGCGCGCTGCACAACGAGACAAACCTTCCGGCGACCGTGCTGCTCGTCATGCCGGAGCAACGCTGA
PROTEIN sequence
Length: 113
MQVTRIAEARAYEAAEHFDMRCLRLQGKEATQTDSVWVGLSHLLPGGHTSMRDAAVEKIYVVIAGEVTVRTPDECVRLGPLDSCRLAAGEPRALHNETNLPATVLLVMPEQR*