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SCNpilot_expt_1000_bf_scaffold_4587_3

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial

near complete RP 43 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 9 / 38
Location: comp(1785..3005)

Top 3 Functional Annotations

Value Algorithm Source
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.1
  • Coverage: 406.0
  • Bit_score: 771
  • Evalue 5.20e-220
tryptophan synthase subunit beta (EC:4.2.1.20); K01696 tryptophan synthase beta chain [EC:4.2.1.20] similarity KEGG
DB: KEGG
  • Identity: 88.5
  • Coverage: 416.0
  • Bit_score: 753
  • Evalue 3.30e-215
  • rbh
tryptophan synthase subunit beta n=1 Tax=Hoeflea sp. 108 RepID=UPI0003669C5E similarity UNIREF
DB: UNIREF100
  • Identity: 91.6
  • Coverage: 406.0
  • Bit_score: 763
  • Evalue 1.00e-217
  • rbh

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Taxonomy

Aquamicrobium defluvii → Aquamicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1221
ATGAACAAGCCGGCCCTTCCCAACTCCTTCCGCACCGGCCCCGACGAGCAGGGCATGTTCGGCATCTTCGGCGGCCGCTTCGTCGCCGAGACGCTGATGCCGCTGATCCTCGACCTCGAGCGCGAGTGGAACCGGGCCAAGGACGATCCGGCCTTCAGGGCCGAGCTTTCGGCGCTGTCGACCCATTACGCCGGCCGGCCGTCGAAGCTCTATTTCGCCGAAGGGCTGACGCGCCATCTCGGCGGCGCCAAGATCTACTTCAAGCGCGAGGACCTGAACCACACCGGCAGCCACAAGATCAACAACTGCCTCGGCCAGATCCTGCTGGCCAAGCGGATGGGCAAGACGCGCATCATCGCCGAGACGGGCGCCGGCCAGCACGGCGTGGCATCGGCGACGGTGTCGGCCCGGTTCGGCTTTCCCTGCGTGGTCTACATGGGCGCCACAGACGTCGAGCGGCAGAAGCCAAACGTCTTCCGCATGAAGCTGCTGGGGGCCGAGGTGCGGCCGGTGTCGTCCGGCCACGGCACGCTCAAGGACGCCATGAACGAGGCGCTTCGGGATTGGGTGACCAATGTCGAGGACACCTACTACCTGATCGGCACCGCCGCCGGCCCGCACCCCTATCCCGAGCTGGTGCGCGACTTCCAGTCGGTGATCGGCACGGAGGCGCGCGCGCAGATGCTGGAGCAGGAGGGCCGGCTGCCGGACGCGATCGTCGCGGCCGTCGGCGGCGGCTCCAACGCGATCGGTCTGTTCCACCCGTTCCTGGACGACAAGGACGTTCGCATCGTCGGCGTCGAGGCGGGCGGCCGCGGGCTCGACGGCATCGAGCACTGCGCCTCGATGAACGCCGGCCGGCCGGGCGTGCTGCACGGCAACCGCACCTATCTGCTGCAGAACGAGGACGGCCAGATCCTCGACGGCCATTCGATCTCGGCCGGGCTGGACTATCCCGGCGTCGGCCCGGAGCATTCCTGGCTGCGGGATACCGGCCGCGTCGACTACGTGCCGATCCTCGACGACGAGGCGCTGGAGGCCTTCCAGCTCTGCACCAAGGTGGAAGGCATCATCCCGGCGCTCGAATCGGCCCACGCCATCGCCCAGGCGATGAAGATGGCGCCGAAGATGCGCGGCGACGAGATCATGATCGTCAACCTCTCCGGCCGCGGCGACAAGGACGTCCACACCGTCGCCAAGATGATGGGCATGGAGATCTGA
PROTEIN sequence
Length: 407
MNKPALPNSFRTGPDEQGMFGIFGGRFVAETLMPLILDLEREWNRAKDDPAFRAELSALSTHYAGRPSKLYFAEGLTRHLGGAKIYFKREDLNHTGSHKINNCLGQILLAKRMGKTRIIAETGAGQHGVASATVSARFGFPCVVYMGATDVERQKPNVFRMKLLGAEVRPVSSGHGTLKDAMNEALRDWVTNVEDTYYLIGTAAGPHPYPELVRDFQSVIGTEARAQMLEQEGRLPDAIVAAVGGGSNAIGLFHPFLDDKDVRIVGVEAGGRGLDGIEHCASMNAGRPGVLHGNRTYLLQNEDGQILDGHSISAGLDYPGVGPEHSWLRDTGRVDYVPILDDEALEAFQLCTKVEGIIPALESAHAIAQAMKMAPKMRGDEIMIVNLSGRGDKDVHTVAKMMGMEI*