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SCNpilot_expt_1000_bf_scaffold_5834_2

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial

near complete RP 43 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 9 / 38
Location: comp(265..1626)

Top 3 Functional Annotations

Value Algorithm Source
Polysaccharide ABC transporter, ATP-binding protein n=1 Tax=Rhizobium sp. RepID=L0NB67_RHISP similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 434.0
  • Bit_score: 484
  • Evalue 1.30e-133
  • rbh
Polysaccharide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CCF18300.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.2
  • Coverage: 434.0
  • Bit_score: 484
  • Evalue 1.80e-133
Polysaccharide ABC transporter, ATP-binding component; K09691 lipopolysaccharide transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 446.0
  • Bit_score: 366
  • Evalue 9.60e-99
  • rbh

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Taxonomy

Rhizobium sp. → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1362
ATGAACCCGGCTGAGCCGGCCGGCGAGGCGCTGCTGTCCCTGCGCGGCGTCGGCAAGACCTATCCGGCGCGCGCCCGCGGCATGGCGCGGCTGGCGCGCGTCGTCACGCGCCGGCCGGAGCAGGACGGCGTGCGGGTGCTCGACGGCGTCGACCTCGATCTGGCGCGCGGCGAGGCGGTCGGCATCGTCGGCCGCAACGGCGCCGGCAAGTCGACCCTTCTGCAGATCGCCTGCGGCATGCTCCAGCCGAGCGACGGCACGGTCTCCTGCACCGGCCGCATCGCGGCGATGCTGGAGCTCGGCGCCGGCTTCAAGCCCGAGTTCAGCGGCCGCGAGAACGTCGTGCTCAACGCCGCCCTCTACGGGCTCGACGAGGCCGCCATCGCCGAGCGGCTGCCGCGCATCGCCGCCTTCGCCGACATCGGCGGCTATTTCGACCGGCCGGTGTCGGAATATTCGAGCGGCATGTTCGCGCGGCTGGCCTTCGCCGTCTGCGCCCATGTCGACGCCGACATCCTCGTGGTCGACGAGGTGCTGGCGGTGGGCGACGGCGCCTTCCAGACGAAGTGCCGGCGCTTCATGGAGGATTTCCTGACGCGCGGGGCGGTGCTGTTCGTCTCGCACGACGAGAACCTGGTGCTGTCGGTGTGCAACCGCGCGATCTGGCTGGAGGCCGGCCGGCCGGTGGCGAGCGGCGCGCCGCAGGAGGTGCTGCGGCGCTACCGGCACGCGGTCGAGCTCGGCGGCGGCGACGGCATGGCGATGCCGCATGCGGGCGAGCGGCCGCAGCATCCGCCGCTCGCCGGCGAGGATGCCCGCCGCGGCCGCAACGCGATCGCCGTCTCGCCCTTCCTCGCCGACGCGCCGAGCCACGGCAATGGCGGCGCGATCATCGACGACGTCCGTTTCGCCGGCCCGGACGGCCGCCGGCTGGAGCGGCTCGACGGCGGCGAGACGGTCGCGCTCGTCTTCGAGGGGCGCGCGCTGCGCGACCTCGAAAGGCCGATCGCAGGCTTCATCTTCCGCGACCGCGGCGGGCAGAACATGTTCGGCGACAACACCTATCTCGCCTATCGCGACGCGCCGGTGGCGATCGAGGCCGGGCAGCGCTTCCGGGCCGTGCTCGAATTCGACATGCCGCTGCTGCCGGATGGCATCTACTCGGTCGCGCCCTCTCTGATCGAGGGCACCCAGCGCAACCACGTGCACCTGTTCTGGATGGAGGAGGCGCTGGTGCTCACGGTGGACGGCTCGCCGGTCTCGATCGGCAAGATCGGCGTGCCGACGCGGATCGAATGCGACGTGCTGGAGGACGAAGACACGGCCGCGCGCCCGCTTGTGGCGGCGCGAAAATCCGTCTAG
PROTEIN sequence
Length: 454
MNPAEPAGEALLSLRGVGKTYPARARGMARLARVVTRRPEQDGVRVLDGVDLDLARGEAVGIVGRNGAGKSTLLQIACGMLQPSDGTVSCTGRIAAMLELGAGFKPEFSGRENVVLNAALYGLDEAAIAERLPRIAAFADIGGYFDRPVSEYSSGMFARLAFAVCAHVDADILVVDEVLAVGDGAFQTKCRRFMEDFLTRGAVLFVSHDENLVLSVCNRAIWLEAGRPVASGAPQEVLRRYRHAVELGGGDGMAMPHAGERPQHPPLAGEDARRGRNAIAVSPFLADAPSHGNGGAIIDDVRFAGPDGRRLERLDGGETVALVFEGRALRDLERPIAGFIFRDRGGQNMFGDNTYLAYRDAPVAIEAGQRFRAVLEFDMPLLPDGIYSVAPSLIEGTQRNHVHLFWMEEALVLTVDGSPVSIGKIGVPTRIECDVLEDEDTAARPLVAARKSV*