ggKbase home page

SCNpilot_expt_1000_bf_scaffold_5834_10

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial

near complete RP 43 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 9 / 38
Location: 9588..11060

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037B2ECD similarity UNIREF
DB: UNIREF100
  • Identity: 48.5
  • Coverage: 495.0
  • Bit_score: 472
  • Evalue 5.60e-130
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ERI32920.1}; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes sp. EGD-AK7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.0
  • Coverage: 494.0
  • Bit_score: 454
  • Evalue 1.70e-124
ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 47.6
  • Coverage: 492.0
  • Bit_score: 448
  • Evalue 2.70e-123

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Alcaligenes sp. EGD-AK7 → Alcaligenes → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1473
ATGGACCCCCATTCCAACCTGACGACGCCCTCGACGCAGCTCCAGCGCCAGGTCTACGAGCCGCTGGTCGGCCGCGACCAGGAGCTCAAGGTCATCCCGATGCTCGCCGAGAGCTGGGAGCAGACCGAGCCGACCCGCTGGCGCTTCAAGCTGCGGCCCAACGTCAAGTTCCACGACGGCGCGGCGCTGACGGCCGACGACGTCATCTTCTCGCTGAAGCGCGTCGCGGCGCCGACCTCGCACTTCCGCCCGGCCGTCGACACCGTCACCGCGGTCGAGAAGGTCGACGACCTGACCTTCGACATCGTGACCAGCGAGCCGGACCTGGTGCTGCTGTCCAAGCTCACCAACGTCGCGATCATGAACAAGGCCTGGTCCGAGGCCAACAACGCCGCGCTGCCGCAGGACATGTCCAAGCAGGAGGAGGCCTTCACCTCCCGCCACTCGAACGGCACCGGCCCCTACATGCTGGAATCGCGCGTTCCCAACGTCGAGACCGTGCTGGTCGTCAACCCGAACTACTGGGGCGAGATCACCGGCAACGTGACGAAATACGTCTCCAAGCCGATCGCCGCAGCCGCGACCCGCGTCGCCGCCCTGCTGTCGGGCGAGGTGAACTTCGTGCTCGACGCGCCGCTGCAGGACATCGAGCGGCTGAAGGCGACCGACGGCATCACCACCTCCGGCGGGCCGGAGCTGCGCACCATGTTCCTGACGTTGAACAACGAGAAGGAGCACCTGACCGGCGACAACCCGCCCGACAAGAACCCGCTGCGCGACCAGCGCGTCCGCAAGGCGCTCTATCAGGCGATCGACATCGACGCGATCCAGTCGAAGATCATGCGCGGCTACGCGGTGCCGACCGCGATCTTCTTCCCGCCCTCCGTGCACGGCTTCCCGGCCGATCTCGACGTGCGTTACCCGTATGACGTCGAGGCCGCGAAGTCGCTCCTGAAGGAGGCCGGCTATCCCGACGGCTTCTCCTTCACGCTGGACTGCACGGCCAACCGCTACGTCAACGACGAGCAGCTCTGCCAGGCGCTGGTGGCGATGTGGGCCAAGGTCGGCGTCAAGGTGACGCCCGCCCCGGTGCCGATCGCCCAGTTCGTGCAGAAGATCACCACGCGCGGCCAGAGCGACATGTTCATGCAGGCGGCCGCCACGACGACGCTCGACGCCTTCTACAGCCTTCAGGCCTGGGTGTTGAGCCCGACCGGCCGCTCCGGCGACGGCCAGTGGAACCTCGGCGGCTACAAGAACGACGAGATCGACAAGGCGATCCTGGCGATCCGCTCCGAGCTCGACGACGCCAAGCGCACCGAGCTGATCCACAAGGCGGTGGAGCTGTGGAAGCAGGACGTCGTCCAGATCCCGCTGTTCCACCCGGTCTCGACCTGGGCCATGCGCAGCAACGTCGACGCCAAGTACCGCTCCGACAACCAGCTTGAAGCCAAGTGGGTGACGATCAAGTAG
PROTEIN sequence
Length: 491
MDPHSNLTTPSTQLQRQVYEPLVGRDQELKVIPMLAESWEQTEPTRWRFKLRPNVKFHDGAALTADDVIFSLKRVAAPTSHFRPAVDTVTAVEKVDDLTFDIVTSEPDLVLLSKLTNVAIMNKAWSEANNAALPQDMSKQEEAFTSRHSNGTGPYMLESRVPNVETVLVVNPNYWGEITGNVTKYVSKPIAAAATRVAALLSGEVNFVLDAPLQDIERLKATDGITTSGGPELRTMFLTLNNEKEHLTGDNPPDKNPLRDQRVRKALYQAIDIDAIQSKIMRGYAVPTAIFFPPSVHGFPADLDVRYPYDVEAAKSLLKEAGYPDGFSFTLDCTANRYVNDEQLCQALVAMWAKVGVKVTPAPVPIAQFVQKITTRGQSDMFMQAAATTTLDAFYSLQAWVLSPTGRSGDGQWNLGGYKNDEIDKAILAIRSELDDAKRTELIHKAVELWKQDVVQIPLFHPVSTWAMRSNVDAKYRSDNQLEAKWVTIK*