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SCNpilot_expt_1000_bf_scaffold_7540_6

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial

near complete RP 43 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 9 / 38
Location: 4014..4721

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Rhizobium loti RepID=UPI000380CEDD similarity UNIREF
DB: UNIREF100
  • Identity: 64.8
  • Coverage: 196.0
  • Bit_score: 243
  • Evalue 1.60e-61
Peptide/opine/nickel uptake family ABC transporter , periplasmic substrate-binding protein {ECO:0000313|EMBL:CDP51478.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.5
  • Coverage: 197.0
  • Bit_score: 244
  • Evalue 1.30e-61
dipeptide-binding protein of ABC transporter; K02035 peptide/nickel transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 63.3
  • Coverage: 196.0
  • Bit_score: 239
  • Evalue 1.20e-60

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Taxonomy

Devosia sp. DDB001 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 708
ATGAAACTGTTCAAAGCCCTGATGGCGGCGGCGGCGCTGGCGCTCGTCACCGGTGCGGCGCAGGCCGCGCGGACCGACGTCACGATCGCCATGCAGCTCGAGCCGCCGAGCCTCGACCCGACCACCGGCGGGGCCGCCGCGGCCATCCGCAGCGTTACCTACGGCAACATCTTCGAGGGCCTGACGAAGATCGACAGCGCCGGCGCCGTGCAGCCGCTGCTGGCGAAGTCGTGGGACATCTCCGACGACGGGCTGACCTACACCTTCCACCTCCAGGACGGCGTCAAGTTCCAGGACGGCACGCCGCTGACGGCCGCCGACGTCAAGTACTCGCTCGACACCGCGCGCGGCGAGAAGTCGGTGAACGCGCAGAAGCAGCTCTTCGCCAAGATCGCCTCGGTGGACGCCGTCGACGACCACACCGTCAAGGTGACGCTCAGCGGGCCGCAGGGCGACTTCCTCTACAACATGGGCTGGGGCGACGCGGTGATCGTCTCGGAGAAGACGGCCGCGTCCAACGGCACCAACCCGGTCGGCACCGGCCCCTACAAGCTCGGCGAATGGGTCAAGGGCGACCACGTCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGACGGCCGCCGTCGCCGCGATCCTGGCCGGCGACGTCGACTATTTCGGCGGCTTCCCGGCGCCCGAGGCGCTGA
PROTEIN sequence
Length: 236
MKLFKALMAAAALALVTGAAQAARTDVTIAMQLEPPSLDPTTGGAAAAIRSVTYGNIFEGLTKIDSAGAVQPLLAKSWDISDDGLTYTFHLQDGVKFQDGTPLTAADVKYSLDTARGEKSVNAQKQLFAKIASVDAVDDHTVKVTLSGPQGDFLYNMGWGDAVIVSEKTAASNGTNPVGTGPYKLGEWVKGDHVXXXXXXXXXXXXXXXXXRRPPSPRSWPATSTISAASRRPRR*