ggKbase home page

SCNpilot_expt_1000_bf_scaffold_10021_13

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial

near complete RP 43 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 9 / 38
Location: 4597..5130

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: 50S ribosomal protein L6, chloroplastic-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C11566 similarity UNIREF
DB: UNIREF100
  • Identity: 89.3
  • Coverage: 177.0
  • Bit_score: 322
  • Evalue 3.40e-85
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 177.0
  • Bit_score: 321
  • Evalue 1.10e-84
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 85.9
  • Coverage: 177.0
  • Bit_score: 313
  • Evalue 5.00e-83

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. ORS3324 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGTCTCGTATCGGCAAGAAACCCGTCTCCGTTCCCGCCGGCGTGACCGCCAGCGTCAACGGCCAGACCGTGACCGCCAAGGGCCCGAAGGGCGAGCTCTCCTTCGTCGTCAACGACGAGGTGCTGGTCAAGCTCGAGAACGGCCAGGTCGCCGTCTCCCCGCGCGACCAGTCGAAGGACGCCCGCTCCAAGTGGGGCATGTCGCGCACGCAGATCGTCAACATCCTGCAGGGCGTGAAGGACGGCTTCGAGCGCAAGCTCGAGATCAACGGCGTCGGCTACCGCGCCGCCATGCAGGGCAGGAACCTGCAGCTCGCGCTCGGCTTCAGCCACGACGTCGTCTACCAGACGCCGCAGGGCATCACGATCGCCGTGCCGAAGCCCACCGAGGTCGTCGTGTCGGGCATCGACAAGCAGCAGGTCGGCCAGGTGGCCGCCGAGATCCGCAAGTATCGCGGTCCCGAGCCCTACAAGGGCAAGGGTGTGAAGTATGCCGAAGAGCGGATCGTCCGCAAGGAAGGCAAGAAGAAGTAG
PROTEIN sequence
Length: 178
MSRIGKKPVSVPAGVTASVNGQTVTAKGPKGELSFVVNDEVLVKLENGQVAVSPRDQSKDARSKWGMSRTQIVNILQGVKDGFERKLEINGVGYRAAMQGRNLQLALGFSHDVVYQTPQGITIAVPKPTEVVVSGIDKQQVGQVAAEIRKYRGPEPYKGKGVKYAEERIVRKEGKKK*