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SCNpilot_expt_1000_bf_scaffold_10021_15

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial

near complete RP 43 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 9 / 38
Location: 5702..6271

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: 30S ribosomal protein S5, chloroplastic-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C10EF3 similarity UNIREF
DB: UNIREF100
  • Identity: 93.2
  • Coverage: 190.0
  • Bit_score: 349
  • Evalue 1.60e-93
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 189.0
  • Bit_score: 360
  • Evalue 1.70e-96
30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 similarity KEGG
DB: KEGG
  • Identity: 94.2
  • Coverage: 189.0
  • Bit_score: 349
  • Evalue 8.70e-94

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Taxonomy

Pseudomonas bauzanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
ATGGCACAGGAACGTAGGGAAGGCGGCCGCGAGCGTGGCCGCGACCGCGAGGAGCGCGATGACGGGATGGTGGACAAGCTCGTCCACATCAACCGCGTCGCCAAGGTGGTGAAGGGCGGCCGTCGCTTCGGCTTCGCCGCGCTGGTCGTCGTCGGCGACCAGAAGGGCCGCGTCGGCTTCGGCCACGGCAAGGCCCGCGAGGTGCCGGAGGCGATCCGCAAGGCGACCGAGTCGGCCAAGCGCGACATGATCTTCGTGCCGCTGCGCTCCGGCCGTACGCTGCACCACGACGTCGAGGGCCGCCACGGCGCCGGCCGCGTGCTGTTGCGCTCGGCCAAGGTCGGTACGGGCATCATCGCCGGCGGTCCGATGCGCGCCGTGTTCGAAACGCTCGGCATGCACGACGTGGTCGCCAAGTCGATGGGGTCGTCGAACCCCTACAACATGATCCGCGCCACGTTCGACGCGCTGAAGAACCAGATGCATCCGAAGGATGTGGCGGCTGCGCGCGGCATCAAGTATTCGATGCTTCAGGCCCGTCGCGGCACTGCCGCCGCGGCCGAAGAATAG
PROTEIN sequence
Length: 190
MAQERREGGRERGRDREERDDGMVDKLVHINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATESAKRDMIFVPLRSGRTLHHDVEGRHGAGRVLLRSAKVGTGIIAGGPMRAVFETLGMHDVVAKSMGSSNPYNMIRATFDALKNQMHPKDVAAARGIKYSMLQARRGTAAAAEE*