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SCNpilot_expt_1000_bf_scaffold_10042_3

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial

near complete RP 43 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 9 / 38
Location: comp(1119..2027)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 n=5 Tax=Mesorhizobium RepID=V7EXF3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 91.4
  • Coverage: 302.0
  • Bit_score: 551
  • Evalue 5.80e-154
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.7
  • Coverage: 302.0
  • Bit_score: 553
  • Evalue 1.70e-154
RNA polymerase sigma-32 subunit RpoH; K03089 RNA polymerase sigma-32 factor similarity KEGG
DB: KEGG
  • Identity: 91.1
  • Coverage: 302.0
  • Bit_score: 549
  • Evalue 5.30e-154

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Taxonomy

Mesorhizobium sp. SOD10 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 909
ATGGCCCAGTCATTACCCAGTATCGTCTCCGGAGAGGGCGGCCTTTCCCGCTATCTGGAGGAAATCCGCCGGTTTCCGATGCTGCAGCCGCAGGAAGAGTACATGCTCGCCAAGCGGTTCGCCGAGCATCAGGACGCCAAGGCGGCCCACAAGCTCGTGACCAGCCACCTGCGGCTCGTCGCCAAGATCGCCATGGGCTATCGCGGCTACGGCCTGCCGATCGGCGAGGTCATCTCCGAAGGCAATGTCGGCCTGATGCAGGCCGTCAAGAAATTCGAGCCCGATCGCGGCTTCCGCCTCGCGACCTACGCGATGTGGTGGATCAAGGCCGCCATCCAGGAATACATCCTGCGTTCGTGGAGCCTCGTGAAGATGGGCACCACGGCCAACCAGAAGCGGCTGTTCTTCAACCTGCGCAAGGTGAAGGGCAAGATCCAGGCGCTCGACGAGGGCGACCTGAAGCCCGAGCAGGTGTCCGAGATCGCCACGCGCCTCAACGTCTCCGAGGACGAGGTGGTGTCCATGAACCGCCGCCTCTCCGGCGACGCCTCGCTCAACGCGCCGATCCGCGCCAGCGAGGGCGAGTCCGGCGAGTGGCAGGACTGGCTCGTGGACGACCACGAGAGCCAGGAGGACATGCTGGTCGAGCAGGACGAGCTGGACAACCGGCGCAGGATGCTGTCGGGCGCCATGAGCGTCCTCAACGACCGCGAGCGCCGCATTTTCGAGGCGCGGCGGCTGTCCGAGGAGCCGATGACGCTCGAGGAGCTGTCGGCCGAGTTCGACATCAGCCGCGAGCGCGTGCGCCAGATCGAGGTGCGCGCCTTCGAGAAGGTGCAGGAGGCGGTCATGGCCGCCGCCCGCAGCCAGGCCCAGGCGCTCCGCACCATAGAGGTCGAGCCGGCCTGA
PROTEIN sequence
Length: 303
MAQSLPSIVSGEGGLSRYLEEIRRFPMLQPQEEYMLAKRFAEHQDAKAAHKLVTSHLRLVAKIAMGYRGYGLPIGEVISEGNVGLMQAVKKFEPDRGFRLATYAMWWIKAAIQEYILRSWSLVKMGTTANQKRLFFNLRKVKGKIQALDEGDLKPEQVSEIATRLNVSEDEVVSMNRRLSGDASLNAPIRASEGESGEWQDWLVDDHESQEDMLVEQDELDNRRRMLSGAMSVLNDRERRIFEARRLSEEPMTLEELSAEFDISRERVRQIEVRAFEKVQEAVMAAARSQAQALRTIEVEPA*