ggKbase home page

SCNpilot_expt_1000_bf_scaffold_3986_7

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: 7113..8429

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IUX1_METNO similarity UNIREF
DB: UNIREF100
  • Identity: 56.9
  • Coverage: 408.0
  • Bit_score: 429
  • Evalue 4.90e-117
  • rbh
RND family efflux transporter MFP subunit; K07799 putative multidrug efflux transporter MdtA similarity KEGG
DB: KEGG
  • Identity: 56.9
  • Coverage: 408.0
  • Bit_score: 429
  • Evalue 1.50e-117
  • rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACL59029.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.9
  • Coverage: 408.0
  • Bit_score: 429
  • Evalue 6.80e-117

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methylobacterium nodulans → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1317
GTGACCTTGGAACCATGCCCAGCTCCGGGCCTGGCTGTCTTTGTTGTTGCAGTTGTCATGGATACACGAGCTACCCCTCCCCAGGAATCGAACGTTCAGACCGGCAAATCGCGAAAATTCCGCTGGTGGCCCTGGTTTCTGCTCTTCGTCGCCGCCATTGCCGGGCTCATCGTCTGGCGCCACCCTTGGCAGCAAAGCGCCACGTCCTTTGGACCGCGCCGCGGGGCACCGATGCAAACCGTGCAATCGGTCGGTGTCTCCCCCGCAACCAAAGGGGATATGCCTGTCACCTTGTCGTCCTTGGGTACGGTGACGTCGCTTGCGACGATCACAGTCCAATCGCAGATCAGCGGCTACCTGACGGCGGTCAATTTCCACGAGGGTCAGATGGTCAAGAAGGGCGATCTGCTCGCCCAGGTGGACTCTCGCGCTTACGAGGTCGCGCTTGCCCAATACCAGGGCCAACTCGAAAGGGATCAGGCACTCCTCGACAACGCACGCCTCGATCTGACCCGCTACGAGCGCCTCATCAAGCAGGATTCGACGACAGGACAGACCCTCGACACGCAGAAGGCTACCGTCAAGCAGGATGAGGGAACGGTCGTCCTCGACCAGGCACAGGTCGATGCACAGAAACTCAATCTGGAATATTGCCGGATCGTTTCGCCGGTCGACGGTCGGGTCGGCCTGCGCCAGGTCGATGCCGGCAACTATGTCACCGCATCCAGCTCCACCGGTATTGTCGTCGTAACGCAGACAACGCCGACTTCGGTGATTTTCACTCTTCCCGAAGATAGCCTGGCGCAGGTCCAGGGCCGATTGAAAGCTGGCGCTCAGCTTGGCGTCGCCGCATATGATCGCACCGGCACGATCAAGCTGGCGGAAGGCACCCTCGACGCCCTCGACAACGAGATCGATACAACAACCGGCACGCTCAAATTGCGCGCGCTGTTCGACAACAAGGACGACAGCCTGTTCCCCAATCAGTTCGTCGATGTGACGCTGCTGGTGGATACGCTGCACGGTGTCGTCCTGGTGCCGGATGCCGCCGTCGACACCGGCACGCCCGGAACCTTCGTCTATGTCTTGAATTCCGACGACACCGTTTCCCTGCGCAAGATAAAGACAGGCCCGTCGGCGGACGGCCAAACTGCGGTGCTCTCCGGGTTGGCCGAGGGAGAGAAGGTCGTGGTGGATGGCGGCGATCATCTGAGCGATGGCGCCAAGGTCAGCATTCCCGGAAGCACGCCAGCGGGCGCGCCCGCTCACAATGGCGGCAAGCAGGGCGGGCGTAAGAAGCCGGGCGCATCGCTATGA
PROTEIN sequence
Length: 439
VTLEPCPAPGLAVFVVAVVMDTRATPPQESNVQTGKSRKFRWWPWFLLFVAAIAGLIVWRHPWQQSATSFGPRRGAPMQTVQSVGVSPATKGDMPVTLSSLGTVTSLATITVQSQISGYLTAVNFHEGQMVKKGDLLAQVDSRAYEVALAQYQGQLERDQALLDNARLDLTRYERLIKQDSTTGQTLDTQKATVKQDEGTVVLDQAQVDAQKLNLEYCRIVSPVDGRVGLRQVDAGNYVTASSSTGIVVVTQTTPTSVIFTLPEDSLAQVQGRLKAGAQLGVAAYDRTGTIKLAEGTLDALDNEIDTTTGTLKLRALFDNKDDSLFPNQFVDVTLLVDTLHGVVLVPDAAVDTGTPGTFVYVLNSDDTVSLRKIKTGPSADGQTAVLSGLAEGEKVVVDGGDHLSDGAKVSIPGSTPAGAPAHNGGKQGGRKKPGASL*