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SCNpilot_expt_1000_bf_scaffold_4682_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: 1..549

Top 3 Functional Annotations

Value Algorithm Source
Lytic transglycosylase catalytic n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHD0_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 182.0
  • Bit_score: 366
  • Evalue 1.60e-98
  • rbh
lytic transglycosylase catalytic similarity KEGG
DB: KEGG
  • Identity: 95.6
  • Coverage: 182.0
  • Bit_score: 366
  • Evalue 5.10e-99
  • rbh
Lytic transglycosylase catalytic {ECO:0000313|EMBL:AGB70091.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 182.0
  • Bit_score: 366
  • Evalue 2.30e-98

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
CGGTTTACCTCTGAGGCGTCTGCTTCGGGCAATCCTGCGCCGCCTGATAATGGCGCGGCTGGCCTCTGCGAACGCGAAATTCAATCCGCCGCCGCGAAATATGGAATACCGGAAGGGATTCTCTATTCGGTCGGTTTGACCGAAACCGGACGCAAGGGATCGCTTTATCCCTACGCGCTCAATGTCGAGGGACGGCCCATGTTTCCGCCGTCGGAAGGGGCCGCGCTGCAGATATTTGCTGCCGCACGGCAGAACGGGGCCAAGCTTATCGATGTCGGATGCATGCAGATCAATCAGTATTTCCATGGCGAAAACTTCACGTCCGTCGCCGCCATGTTCGATCCGCGTAGTAATGTCGAGTATGCTGCAAAGTTTCTCCGCAATCTGCACGACAGGCATGAGACCTGGACAATGGCGGTAGCGAGATACCACGCCGGTCCGAACAACGACCCCGCCCAGAAGGTCTATGTCTGCCGCGTGATCGCCAATCTTGTCGCCACCGGTTACGGGAAATGGACGCCCAATGCGGCGACGTTCTGCCGGAATTAG
PROTEIN sequence
Length: 183
RFTSEASASGNPAPPDNGAAGLCEREIQSAAAKYGIPEGILYSVGLTETGRKGSLYPYALNVEGRPMFPPSEGAALQIFAAARQNGAKLIDVGCMQINQYFHGENFTSVAAMFDPRSNVEYAAKFLRNLHDRHETWTMAVARYHAGPNNDPAQKVYVCRVIANLVATGYGKWTPNAATFCRN*