ggKbase home page

SCNpilot_expt_1000_bf_scaffold_4682_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: 830..1501

Top 3 Functional Annotations

Value Algorithm Source
Putative transcription regulator protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6VB10_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 96.9
  • Coverage: 223.0
  • Bit_score: 434
  • Evalue 7.70e-119
  • rbh
Putative transcription regulator protein {ECO:0000313|EMBL:ENN88252.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.9
  • Coverage: 223.0
  • Bit_score: 434
  • Evalue 1.10e-118
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 97.8
  • Coverage: 223.0
  • Bit_score: 433
  • Evalue 5.40e-119
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 672
ATGATCGTAGTGGTTGATGAGCGAGAGCTCGTTAAGGACGGATATACATCACTGTTTGGGCGCGAGGGCATCCCTTCCACGGGGTTTGATCCACGCGAATTCGGCGAATGGGTCACGACTGCGGCAGAGGGCGACATTGCCGCAGTCGAGGCCTTTCTGATCGGGCAGGGCCAGCAGGTGCACGAGCTTCCCAGGGCGATTCGAGACCGGACGACAGCACCTGTCATCGCGGTCAGCGACCAGCCCTCGCTGGAAGCAACCCTTGCACTTTTCGATTGTGGCGTGGACGACGTCGTGCGCAAGCCGGTGCATCCTCGCGAGATCCTTGCGCGGGCCGCGGCGATCCGCCGCCGGTTGAAGGCGATCAGCAACTATACCGATATCGGCCCTATTCGGGTCTTTGCGGATGGCCGCGATCCGGAAATCAACGGTTCCGTCTTCGCCTTGCCGCGCCGCGAGCGCCGCATCCTCGAATACTTGATCGCCAATCGCGGTCGCCGCGTGACGAAGACGCAGATCTTCAACGCCATCTACGGCATCTTCGACGAGGAAGTCGAAGAGAACGTAGTCGAAAGCCACATCTCCAAGCTGCGTAAGAAGCTGCGCAAGAAGCTCGGTTTCGATCCGGTCGATTCCAAGCGCTTCCTTGGCTACTGCATCGACTGGAGCTGA
PROTEIN sequence
Length: 224
MIVVVDERELVKDGYTSLFGREGIPSTGFDPREFGEWVTTAAEGDIAAVEAFLIGQGQQVHELPRAIRDRTTAPVIAVSDQPSLEATLALFDCGVDDVVRKPVHPREILARAAAIRRRLKAISNYTDIGPIRVFADGRDPEINGSVFALPRRERRILEYLIANRGRRVTKTQIFNAIYGIFDEEVEENVVESHISKLRKKLRKKLGFDPVDSKRFLGYCIDWS*