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SCNpilot_expt_1000_bf_scaffold_5382_8

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: 4801..5847

Top 3 Functional Annotations

Value Algorithm Source
GGDEF family protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UD69_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 79.4
  • Coverage: 349.0
  • Bit_score: 533
  • Evalue 1.90e-148
  • rbh
GGDEF family protein {ECO:0000313|EMBL:ENN88113.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.4
  • Coverage: 349.0
  • Bit_score: 533
  • Evalue 2.70e-148
Diguanylate cyclase (GGDEF) domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 36.7
  • Coverage: 346.0
  • Bit_score: 222
  • Evalue 2.30e-55

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Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1047
TTGTTGTCGCGGCTTAGAATTCAACAGCTGCAATGGATCGGCGCCGTAGCTGTTATCATGGTATGCTTGATGATGGCAGGCTCGACGATTGCCTTCAGCCTGTCGGATTACATCAATTACAAGCGCGGCGTCACAGAGTTCAGCCGCTTTCACACCGCGTTGCATGCGGCCGCGACCATATCGAGAGAACGCGGGCCGGCAAATAGTCTCATGGGCGCCACGCAAGAAGAGCAGCCTCAATTTACTGCCGCCTTGAAGGCAAGCCGCGCGGAGACTGACAAGGATATCACCGAGCTCGAGGCGCTGTTCAAGACGGAGATAGATCAATCGGCGGAGATGCGCAGCGCGTTCGCTGCCGTCAAGGCCCAGTTGGAAAGCGGCCGGCGAGCAGTGGACGCCGTGGCTGCCATGCCGCTCAGCGAGCGCAGCGGTGCCAAGATTGCCGACGCCATACAGGCTATGTTCCGCGCCGCCGACCGCGCTCAGGATTACCGGGATGTCGCCGGCCGCTCGATTATTGCACTCGCCCCTGAGACGGGCGCCGAGGTGATGCTGTCCTCGATGGCTGGAACACTCAGGGAACGTGCGGGAAGAGTGGGCTCGTATGTGGTCATGATGCTGACATCGCAAGGGCAGGCCCGTTCCCACGACCGGGTCGCGTTTGAAAGCGAGTTGAATCGCCTTTTCGAAGTGAATGTGCTGCTGAAGACCTACGCTCCCGCCGCGTTGCAATCCCAGGACGTAGCGCAGCTGTTGGACCAGGTGACGATAAGCTACTTTTCCGGATCTTTGCCTTACGCTCAACGCGTCGCCTTCGAGCTCAACACGGGCCATGCACCGACGCCAGGCGAATTCACAGCCAAATATGTGCCTGGAATGAAGTCGACTGAAAACTTGCGCGAACTGATCGAAGCCGTAGCACTGGTATCGCTCGAGAAAGTACAGCAGAAAGCCCTGAAAGCGATGCTGGTCTCCGCACTGCTCGCCGGCATGGCCATATTGGTCATGATCGGACTGGCCTACGTGCTCAGGCGATCGCTTTTCCGG
PROTEIN sequence
Length: 349
LLSRLRIQQLQWIGAVAVIMVCLMMAGSTIAFSLSDYINYKRGVTEFSRFHTALHAAATISRERGPANSLMGATQEEQPQFTAALKASRAETDKDITELEALFKTEIDQSAEMRSAFAAVKAQLESGRRAVDAVAAMPLSERSGAKIADAIQAMFRAADRAQDYRDVAGRSIIALAPETGAEVMLSSMAGTLRERAGRVGSYVVMMLTSQGQARSHDRVAFESELNRLFEVNVLLKTYAPAALQSQDVAQLLDQVTISYFSGSLPYAQRVAFELNTGHAPTPGEFTAKYVPGMKSTENLRELIEAVALVSLEKVQQKALKAMLVSALLAGMAILVMIGLAYVLRRSLFR