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SCNpilot_expt_1000_bf_scaffold_6851_5

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: 3069..3239

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI00037DE7CE similarity UNIREF
DB: UNIREF100
  • Identity: 70.6
  • Coverage: 51.0
  • Bit_score: 77
  • Evalue 4.70e-12
RNA binding protein {ECO:0000313|EMBL:CDM61463.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.3
  • Coverage: 55.0
  • Bit_score: 77
  • Evalue 8.50e-12
RNA binding protein similarity KEGG
DB: KEGG
  • Identity: 70.0
  • Coverage: 50.0
  • Bit_score: 75
  • Evalue 5.60e-12

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Taxonomy

Rhizobium sp. LPU83 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 171
ATGGCTTTGAATGTGCTCTTCATTGGCGGTACCGGCCAAATCTCATATCCCTGCGTCGAGCGTGCTGTTGACGAGGGACATCGCGTCAGTGTCTACAACCGCGGCCTGAGGGGCGACCCAGCGATCCATCGGCTGCGGAGCGTCGGGGGAAGGCCGTCATGTACGAAGTGA
PROTEIN sequence
Length: 57
MALNVLFIGGTGQISYPCVERAVDEGHRVSVYNRGLRGDPAIHRLRSVGGRPSCTK*