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SCNpilot_expt_1000_bf_scaffold_9444_6

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: comp(2253..2570)

Top 3 Functional Annotations

Value Algorithm Source
Lambda repressor-like, DNA-binding protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HD64_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 42.9
  • Coverage: 105.0
  • Bit_score: 97
  • Evalue 8.10e-18
Lambda repressor-like, DNA-binding protein {ECO:0000313|EMBL:EPE96634.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.9
  • Coverage: 105.0
  • Bit_score: 97
  • Evalue 1.10e-17
Helix-turn-helix domain protein (modular protein) similarity KEGG
DB: KEGG
  • Identity: 48.0
  • Coverage: 98.0
  • Bit_score: 92
  • Evalue 8.20e-17

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Taxonomy

Rhizobium grahamii → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 318
ATGGCAAAGCGCATCGAACATATCGACATCGAGGTTGGAGCCCGCATTCGGGATTTCCGCAAGATCCGTGGCGTCACGCAGACTGAGCTTGCAACCGCCCTCGGCGTCACCTTTCAGCAGGTGCAGAAATACGAGAAGGGCACCAACCGCGTTTCCGTCGGCGCTCTCGTCGCAATATGCCGCACGCTGAATATCGAGCCCATGGATTTACTCGGCGTCTATTTCGGTGACAGCGAGAACGCTGCGACGCCAGCCCTTCTCGCCGAGGTCAAAAATCTCCGCACCAAGCTTTCCGACATTCAACAGCTCTGCGCCTGA
PROTEIN sequence
Length: 106
MAKRIEHIDIEVGARIRDFRKIRGVTQTELATALGVTFQQVQKYEKGTNRVSVGALVAICRTLNIEPMDLLGVYFGDSENAATPALLAEVKNLRTKLSDIQQLCA*