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SCNpilot_expt_1000_bf_scaffold_8630_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: comp(97..699)

Top 3 Functional Annotations

Value Algorithm Source
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.7
  • Coverage: 194.0
  • Bit_score: 298
  • Evalue 6.40e-78
Lysozyme n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LK03_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 64.3
  • Coverage: 196.0
  • Bit_score: 269
  • Evalue 3.80e-69
phage related lysozyme similarity KEGG
DB: KEGG
  • Identity: 64.3
  • Coverage: 196.0
  • Bit_score: 269
  • Evalue 1.20e-69

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGCCGATCAATAAGCTTCGCGCCACGCCGCGGGCGATGGGTGCTATTGCCGCGATTTCGGCCGCCGCAGTCGCCGGATATGTCGCGATTTTTCCCGGACAACCTTCCGTCCATGAAGATACGGCTCTCGCCATCAAGACGCTTGTCGTTCCTTGGGAGGGAGATGCCCTCAAGGCCTATCTGGACAAAATCGCAAAGCCGCCCGTCTGGACGATCTGCAATGGCGATACCAACAATGTGAAGCCGGGCATGGTTGAAACGCCTGAGGGCTGCAATAGCCGATTGGTGGTCAAGATGGGGCGAGACTATCGACCTGCGCTGGTGAAATGCATTCCTAGTTGGGATGCGAGGCCGCTGAGCTGGCGCAGCATGATGATCTCGCTCTCGTGGAATATCGGGACAGGTGGCGCTTGCAACTCAACCGCCGCTCGCCTCGGCAAGGAAGGCCAGTATCTGGCAAGCTGTAACGCCGCAACGGCATTCAACCGGGCCGGCGGCCGCGTGATCATCGGATTGGTCAGGCGTCGAGAAATGGGAGACGCCAGCCGGATCGGTGAAGGCGAGCTTTGCGTATCTGGTTTGGCAGGCGCGGCGAAGCCCTAG
PROTEIN sequence
Length: 201
MPINKLRATPRAMGAIAAISAAAVAGYVAIFPGQPSVHEDTALAIKTLVVPWEGDALKAYLDKIAKPPVWTICNGDTNNVKPGMVETPEGCNSRLVVKMGRDYRPALVKCIPSWDARPLSWRSMMISLSWNIGTGGACNSTAARLGKEGQYLASCNAATAFNRAGGRVIIGLVRRREMGDASRIGEGELCVSGLAGAAKP*