ggKbase home page

SCNpilot_expt_1000_bf_scaffold_8165_4

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: comp(3983..4297)

Top 3 Functional Annotations

Value Algorithm Source
Lipid A 3-O-deacylase (PagL) superfamily n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LMP6_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 104.0
  • Bit_score: 220
  • Evalue 6.30e-55
lipid A 3-O-deacylase (PagL) superfamily similarity KEGG
DB: KEGG
  • Identity: 94.2
  • Coverage: 104.0
  • Bit_score: 220
  • Evalue 2.00e-55
Lipid A 3-O-deacylase (PagL) superfamily {ECO:0000313|EMBL:AGB71345.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 104.0
  • Bit_score: 220
  • Evalue 8.80e-55

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
ACATCGATCGGCACGGAAGGATCTGCAACACGGGTTTATGGCGGCCTCTCCTGGACGCTCACCCATAGCAACGGTATCTTCACGGAAATCGGCTTCGGCGGCACGGTGCACACCGGCAACCTCGACGACTGGAGGGAACACGGCCCGATGCTCGGCTGTCGGCTGCTCTTCCACGAATATGCCGGCCTCGGATACAATTTCGACAGCCACTGGAACGTGATGGCGCAGATCGCGCATTCGTCGCACGCCGATCTTTGCGACGGCCCCAACGGCGGGATGACGCGCGCAGGCGTCATGGTCGGCTACAAGTTCTGA
PROTEIN sequence
Length: 105
TSIGTEGSATRVYGGLSWTLTHSNGIFTEIGFGGTVHTGNLDDWREHGPMLGCRLLFHEYAGLGYNFDSHWNVMAQIAHSSHADLCDGPNGGMTRAGVMVGYKF*