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SCNpilot_expt_1000_bf_scaffold_7902_4

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: comp(5330..6700)

Top 3 Functional Annotations

Value Algorithm Source
Multidrug and toxin extrusion (MATE) family efflux pump n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LXN6_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 456.0
  • Bit_score: 772
  • Evalue 1.90e-220
  • rbh
multidrug and toxin extrusion (MATE) family efflux pump similarity KEGG
DB: KEGG
  • Identity: 88.6
  • Coverage: 456.0
  • Bit_score: 772
  • Evalue 5.90e-221
  • rbh
Multidrug and toxin extrusion (MATE) family efflux pump {ECO:0000313|EMBL:AGB74924.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 456.0
  • Bit_score: 772
  • Evalue 2.60e-220

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1371
ATGACGACGGTCGTGGATATGAACGATCCGCGCATCCCGCGGCTCGTTCTGGCTGTCGCGCTCCCGGCCGTGGCGGGATTGGCCGCCAGCGCCGGACATCATGCGATCAATGCGGTCTTTCTTGGCGCACTCGGGCCAGACGTGCTGGCCGGCATCAGTCTGGTCATGCCGCTGTTTCTGCTTGTCGCTGCGGCCGGCCAGGGGCTGGGTATCGGGCTTGCCACGCTGCTGGCGCGCCATCTCGGCGAACGAGATCTTAAAGCTGCGTCGTCGGTTGCGACGACAGCGCTTGCCGCGACGATGCCGCTTGGCATCCTCCTGTCGATCCTGATCTATCTCGGCCTGCCGGATTTTGTCGGGGCACTCGGCGCGAGCGACAGCCTCCTTGCTCCGGGGCTCGATTACGGCCGGCTGCTGGCATTCGGGGTGACGCTCGGCCTTCTGCAGGCGATCTGCGATTTCATCGCAATCGCTGAAGGCAATTCACGTTTCTCGATGATCGTGCTGATCGCGAGTTTTGCGCTGAATGCGGTTCTCGATCCCGTCTTCATCTTTCTTTTCAAGCTCGGCGCGTCCGGAGCGGCTTTGGCGACCATCGTTTCGTCGATTGCAGCCCTTGCATGCTATGCCGCTTACTTCCTGCGCCACTGGGGGGCCGTCAACGTGGCCCGCGGGGCGGTATGCTGGCAATTGCTTCGGCCGATCGCCCGGATCGGCATTCCCGCGGCGGCGACGAGCATCGTCACCGGGCTTGGCTTTCTGGTCCTGATGCGGCAGGCCGCGGTCCACGGCGGCGACGCGGGTGTTGCCGCAACGGCGATCGCCATTCGCTTGATGACATTGGGTCAGCTTCCGTTGTTCGGCTTTTGCCTTGGGGCGCAAAGCGTCGTCATCCATGCCTTCGGCGCCGGCGATGCGGAGCGATTGAAGGCGGCCGTCCGGTTCATGCTGGCCGTGACAATACCCGTCGCGCTGCTCTATTCCATCCTGCTGTTTTTGGCCGCCGAGCCGATCGCGCGCCTGTTCACGGATAGCGCCGAGGTGGTCGACGAGGCAGTCGCGTGGCTGCGGGCACTCTTTCCGATCTTTCCGCTTGCCGCCTTTCAATCCGTGCTGCTCGTCATGCTGCAATCGCGGGGCAAAGCCGGGCTCTCCGCCCTCGTGGGGCTTGCGCCGCAGGGCTATTTGTTGATCCCGCTTCTGCTCTTGCTGCCGCTTTGGATGGGTTTTGCCGGCGTCTCCATTGCCGCCGCCAGCGCCGCCATCCTTGCCGCCATCCTCGGCGGCTTCGTCGGATGGCGCGAATGGCTCGCCATTTTGCCAACCGACGCGCCAGCCCGCCTTGCGGGCCAATCGACACTTCACCCCTGA
PROTEIN sequence
Length: 457
MTTVVDMNDPRIPRLVLAVALPAVAGLAASAGHHAINAVFLGALGPDVLAGISLVMPLFLLVAAAGQGLGIGLATLLARHLGERDLKAASSVATTALAATMPLGILLSILIYLGLPDFVGALGASDSLLAPGLDYGRLLAFGVTLGLLQAICDFIAIAEGNSRFSMIVLIASFALNAVLDPVFIFLFKLGASGAALATIVSSIAALACYAAYFLRHWGAVNVARGAVCWQLLRPIARIGIPAAATSIVTGLGFLVLMRQAAVHGGDAGVAATAIAIRLMTLGQLPLFGFCLGAQSVVIHAFGAGDAERLKAAVRFMLAVTIPVALLYSILLFLAAEPIARLFTDSAEVVDEAVAWLRALFPIFPLAAFQSVLLVMLQSRGKAGLSALVGLAPQGYLLIPLLLLLPLWMGFAGVSIAAASAAILAAILGGFVGWREWLAILPTDAPARLAGQSTLHP*