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SCNpilot_expt_1000_bf_scaffold_10536_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: comp(112..783)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U7U0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.2
  • Coverage: 222.0
  • Bit_score: 404
  • Evalue 5.00e-110
  • rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ENN88619.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.2
  • Coverage: 222.0
  • Bit_score: 404
  • Evalue 7.00e-110
transcriptional regulator, TetR family similarity KEGG
DB: KEGG
  • Identity: 91.0
  • Coverage: 223.0
  • Bit_score: 402
  • Evalue 7.80e-110
  • rbh

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Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 672
ATGACCAAAGCGCAAGCGGCAAAGATCGAGCGTCTTACGCGTAAGAACGATCCAGACGCGACCAAGGAAAATATTCTCAAAATCGCCACCGAGGAATTTGTCGCAGCCGGGTTTTCCGGTGCGCGCGTGGACGAGATTGCCGAACGTACCAAGACGTCGAAGCGGATGATCTACTATTATTTCGGCAGCAAGGAGGGGCTCTATCTTGCCGTTCTTGAGCAAGCCTATACGAAGATCCGCACGCTTGAGAGCGAGCTCGCCCTTGAAAACATGCCGCCCATTCAGGCGATGGCGCAATTGATCGCCAGTACCTTCGATCATGACGATCAAAACCCGGATTTCGTCCGCCTGGTCAGCATCGAGAACATCCATCGTGCCGAGAATATGAAACGTTCGGTTGTCCTGTCGCAGATGAACATCGCAGTCATCGACATCATCAAGGAAATCCTCGAACGAGGTTATGCCGATGGCAGCTTTGTGCGTCAGGTCGACCCGGTCGACCTACACATGATGATCAGCGCTCAGTGCTTCTTTCGCGTTTCCAACCGGCACACCTTCGGCGCGATCTTCGAGCGCGACCTTTCTTCAGAGGAATTGAAGAAGCGGCACAAGTCTTTGATAGTCGACGCCATTCTCGCCTTTCTAAGAAGCCCGCCATCCGAGATGCTCTGA
PROTEIN sequence
Length: 224
MTKAQAAKIERLTRKNDPDATKENILKIATEEFVAAGFSGARVDEIAERTKTSKRMIYYYFGSKEGLYLAVLEQAYTKIRTLESELALENMPPIQAMAQLIASTFDHDDQNPDFVRLVSIENIHRAENMKRSVVLSQMNIAVIDIIKEILERGYADGSFVRQVDPVDLHMMISAQCFFRVSNRHTFGAIFERDLSSEELKKRHKSLIVDAILAFLRSPPSEML*