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SCNpilot_expt_1000_bf_scaffold_12967_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: 1675..3039

Top 3 Functional Annotations

Value Algorithm Source
Acid tolerance and virulence protein AtvA n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LNM6_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 89.2
  • Coverage: 465.0
  • Bit_score: 835
  • Evalue 3.00e-239
  • rbh
atvA; acid tolerance and virulence protein AtvA similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 465.0
  • Bit_score: 835
  • Evalue 9.60e-240
  • rbh
Acid tolerance and virulence protein AtvA {ECO:0000313|EMBL:AGB72321.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 465.0
  • Bit_score: 835
  • Evalue 4.30e-239

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1365
ATGATCTTGAAATACGCAATGTCATTGGTTTTCGCCGGCATGCTGTCGATGGGCCTGCTCGCCACGGGCGCGGCAAGGGCCGACGAAGACGATAGCAAATACGATCTGGGCATGATCCCGGCGCCGCATATCATGCGACCGCAGGGCAAGGTTTCGAATGAAGTCGTGCTGATTTCCGATCTCGCCGGTTGGGGCGACAAGGAGAAGGCGGTTGCCGACAAGCTCGTCGCCAACGGCTCGCTGGTCATCGGCATCGACTATNNNNNNNNNNNNNNNNNNTGCATCTATATCGTCGCGGATCTGGAATCGCTCAGCCAGCAGGTGCAGCGCTCCTTTGCCGACAGCACCTATCAGCTTCCGATCATCGCGGGCGTCGGCGCGGGCGGCGCCATGGCGCTGACGATTGCGGCCCAGACGCCGGATGCGACCGTTGCCGGTACGCTCGCCGTCGATCCGACGGCAGGCATTGGGCTGAAGCAGGAACTCTGCACGCCGGCCGAAAAGAAGACCGATGGCGACATGGTGTCCTTCGGCCTGCAGGACGGCACCTTGCCGAACCCGATCCTCGTCACCTTCACCGCCAACGCGCCGAAGGACGGACGCGAGCATGTCGAGGAGCTCCAGAAGGATCATCCCGACGTCCAGGCAACGGATTCGGACAATACCGACACCTATGCGACGCTCGAGGCTTCGCTTGCGGATCTGATGAAGACGATCGACAGCTCCAAGTCGCCGCTCGGCCTGCCGGTCGACGTCATGGAGACGACGCCAACGGAGGACACGCTCGCCATCGTCTATTCCGGCGACGGCGGCTGGCGCGATATCGACAAAGAAGTCGGCAGCTATCTGCAGGATCAGGGCATTCCGGTCGTCGGCGTCGATTCACTGCATTATTTCTGGACCGAGAAGGACCCGCAGCAGACGGCAACGGACCTCGGACGGATCATCGACTTCTACACCAAGCGCTTCAAGGTCAAGCATGTGGTGTTGGTCGGCTACTCCTTCGGGGCCGATGTGCTGCCGGCGAGCTATAATCGCCTGCCGCAGGCTGCAAAGGACAAGATCGTGCAGATATCGCTGCTGTCGCTGTCGCAGAAGGTCGACTATGTGATCTCGGTCATGGGCTGGCTCGGCGCGACAAGCGAAGGGAAGGGCGGCGATCCCGTCACCGACCTCAAGTCGATCAATCCGAAGATGGTGCAGTGCGTCTATGGCAAGGATGACGACGAAGATGTCGCCTGCCCGCTGCTGAAGGGCACCGGTGCAGAAATCATCGCCATGGATGGCGGCCATCACTTCGACGACGATTACGAGGCGCTGGCGAACCATATCATCAATGGTCTGAAGAGCCGCCTCGGCGAGTGA
PROTEIN sequence
Length: 455
MILKYAMSLVFAGMLSMGLLATGAARADEDDSKYDLGMIPAPHIMRPQGKVSNEVVLISDLAGWGDKEKAVADKLVANGSLVIGIDYXXXXXXCIYIVADLESLSQQVQRSFADSTYQLPIIAGVGAGGAMALTIAAQTPDATVAGTLAVDPTAGIGLKQELCTPAEKKTDGDMVSFGLQDGTLPNPILVTFTANAPKDGREHVEELQKDHPDVQATDSDNTDTYATLEASLADLMKTIDSSKSPLGLPVDVMETTPTEDTLAIVYSGDGGWRDIDKEVGSYLQDQGIPVVGVDSLHYFWTEKDPQQTATDLGRIIDFYTKRFKVKHVVLVGYSFGADVLPASYNRLPQAAKDKIVQISLLSLSQKVDYVISVMGWLGATSEGKGGDPVTDLKSINPKMVQCVYGKDDDEDVACPLLKGTGAEIIAMDGGHHFDDDYEALANHIINGLKSRLGE*