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SCNpilot_expt_1000_bf_scaffold_12644_5

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: 3926..4651

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LKU3_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 241.0
  • Bit_score: 426
  • Evalue 2.30e-116
  • rbh
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 241.0
  • Bit_score: 426
  • Evalue 7.10e-117
  • rbh
Extracellular ligand-binding receptor {ECO:0000313|EMBL:AGB71331.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 241.0
  • Bit_score: 426
  • Evalue 3.20e-116

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 726
ATGGAAGACGCTCTGAAGAATGGCTGGCCGCTGTTTCGGCTGGCGCCGGTCGACGCCGCCGAGGCCTCCATGGCGATCGCCACCATCCTGAAAAACTGGGCGTCAGAGCCGATGGCGCTGATCGACGACGGCACCATCCACGGCCGCGAACTGGTTGGCGCGATTCGAAGCGCGCTCGAGGAAAAGGGCCTGAAGCCGGTCTTCACCGACACCTACCGCCCCGGGCAGGATCAACAGATCGCGCTCGTGCGCCGCCTGAAGAAAGCGGGAGCAACCCGCGTCTTCGTCGGCGGCGACCGCAGCGATGTCGCCGTGATCGCCCGCGACGCCAAGAGCGAGAACATCCCGCTGGTGCTGATGGGCGGCGATGCCATGCGCGCTGCCGATACGCCCGTTCCGTTGCTGGACGGCGTGCAGGCGATCGCGCTGCCCGACTATGCAAGCCTGCCGGCGGCACAGCAGACCGTTCAGGCCATGCGCGCCGGCGGCGTCGAACCGGACGGATATATCCTGCCGGCCGCAGCCGCCGCTCAGATCGCCAGCCAGGCGGCGGAAAGCGCCAAGGCGGATAACAGGCCCGTTGCCGACAAGCTCATCGGCACGACATTCCAGACCGCAATCGGCCCGATCTCATTCGGACAGAACCACGAATTGACCGAGAACCCCTATCGGCTGCTGGAATGGCGCGGCAATGGCTTCGTACCGGTAGCGACGTCGTCGAATTGA
PROTEIN sequence
Length: 242
MEDALKNGWPLFRLAPVDAAEASMAIATILKNWASEPMALIDDGTIHGRELVGAIRSALEEKGLKPVFTDTYRPGQDQQIALVRRLKKAGATRVFVGGDRSDVAVIARDAKSENIPLVLMGGDAMRAADTPVPLLDGVQAIALPDYASLPAAQQTVQAMRAGGVEPDGYILPAAAAAQIASQAAESAKADNRPVADKLIGTTFQTAIGPISFGQNHELTENPYRLLEWRGNGFVPVATSSN*