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SCNpilot_expt_1000_bf_scaffold_14952_4

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: comp(2017..2742)

Top 3 Functional Annotations

Value Algorithm Source
Two-component response regulator protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JMX5_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 92.5
  • Coverage: 241.0
  • Bit_score: 446
  • Evalue 1.20e-122
  • rbh
Putative two-component response regulator {ECO:0000313|EMBL:GAJ92156.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 241.0
  • Bit_score: 448
  • Evalue 7.80e-123
two-component response regulator protein; K02483 two-component system, OmpR family, response regulator similarity KEGG
DB: KEGG
  • Identity: 92.5
  • Coverage: 241.0
  • Bit_score: 446
  • Evalue 3.90e-123
  • rbh

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 726
ATGCAAAAAGCTGCGCACATCGCCGTCGTCGATGATTATTCGGACATAAGGGACCTCGTCGGCCAATATCTCGAACAGCAGGGTTACAAGGTCAGCGTCGCCGATAGCGGGCTTGCCCTGAGACGAATCCTCGAGCGCGGCGCCGTGGATCTGATCGTTCTCGATGTCATGATGCCCGGTGAGGATGGTCTTTCCGTCTGCCGTCATCTGCGAGCGACAACGGATACCCCCATCATCTTTTTGACCGCCATGAGCGAGGATACCGACCGCATCATCGGCCTCGAATTGGGAGCGGACGACTATCTCGTCAAGCCGTTCAATCCGCGTGAATTACTGGCGCGCATCAGGGCCGTCCTGCGCCGGGTCAACGGCGTGCCGCAGCAGCAGCGGGAAACGCTGAAGAAGGCCAGGGTCGTCCGCGTCGGGCAGTGGCGCGTGAACATGGGTCGGCAGGAGCTTTCCGGCGACGATGGCGTCGGCATCCCCCTTAGCACGGCCGAATTCCGGCTTTTGAAGGTTTTTCTCGAGCGCCCGGGCATTGTCCTCAGCCGCGAGCAGCTTCTCGATCTGACTGTCGGGAGAACCGCTGATATCTTCGACAGAAGCATCGATAATCAAGTGAGCCGCCTGCGCAAGAAGATCGAGCCGGACCCGAAGAACCCATCGGTCATCAAGACGCATTGGGGTGGCGGCTATAGCCTCTCGGCGGATGTGGGGTTCGAATGA
PROTEIN sequence
Length: 242
MQKAAHIAVVDDYSDIRDLVGQYLEQQGYKVSVADSGLALRRILERGAVDLIVLDVMMPGEDGLSVCRHLRATTDTPIIFLTAMSEDTDRIIGLELGADDYLVKPFNPRELLARIRAVLRRVNGVPQQQRETLKKARVVRVGQWRVNMGRQELSGDDGVGIPLSTAEFRLLKVFLERPGIVLSREQLLDLTVGRTADIFDRSIDNQVSRLRKKIEPDPKNPSVIKTHWGGGYSLSADVGFE*