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SCNpilot_expt_1000_bf_scaffold_16681_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: comp(1315..2304)

Top 3 Functional Annotations

Value Algorithm Source
Tyrosine recombinase XerD n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LRB1_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 92.1
  • Coverage: 329.0
  • Bit_score: 591
  • Evalue 5.60e-166
  • rbh
site-specific tyrosine recombinase XerD similarity KEGG
DB: KEGG
  • Identity: 92.1
  • Coverage: 329.0
  • Bit_score: 591
  • Evalue 1.70e-166
  • rbh
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.1
  • Coverage: 329.0
  • Bit_score: 591
  • Evalue 7.80e-166

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 990
ATGAGCGCACAAGCCGCCGACAAACGGACTGGCAAGCGGGATCTCGGGCGCGCGCACCTGGAAGCCTTTCTGGAGATGATGAGTGCCGAGCGGGGTGCGGCCGTCAACACGCTGCAATCCTACGAGCGCGATCTCGAGGATCTCCATGCCTTCCTGTCCGGACAGGGCGTCCGCTTGACGGAGGCCAGCGCGAGCGAGCTCGGCGCCTATCTTTCCAGCCTTGCGGGCCAGGGTTTCAAGCCCTCCTCCCAGGCGCGCCGCCTCTCTGCCATGCGGCAGTTCTACAAATTCCTCTATGCGGAAGGCCTGCGCACGGACGACCCCACGGGAATCCTCGATGCACCGAAGAAGGGCCGCGCCCTGCCGAAGATCATGGGCGTGGACGAAGTGACGAGGCTGCTCACGCAAGCGGAGCAGGAAGCAGCACTCGAAGGACCCGACCGGCTACAGCGCCTGCGCATGCTGGTGCTTCTGGAAATGCTCTACGCTACCGGTATGCGCGTCAGCGAACTCGTCTCCCTGCCGGCGAAGGTGCTGGACCAGGAAGGCCGCTTCCTGATGATCCGCGGCAAGGGCAACAAGGAGCGGCTGGTGCCGCTGTCGCATTCGGCCATTTCGGCGCTGAAGACCTATGGGCGGCTGCAGGCCGAGATTGCGGCGCATGCCAAGACCCCTGCCCCTGAAAGCCCATGGCTTTTCCCCGCCGCCTCCAAGCAGGGTTATCTTCCGCGCCAGGTCTTTGCGCGCGACCTCAAGGATCTGGCAATTCGGGCCGGTCTCACGCCTTCGATGATCTCGCCGCACGTGATGCGCCATGCCTTCGCAAGCCATCTTCTGGCCAACGGCGCGGACCTGCGCGTGGTCCAGGAACTTCTCGGCCATTCGGACATTTCGACGACGCAAATCTATACACATGTGCTGGAAGAACGCCTTCATCAGCTGGTCCAAACGCATCACCCCCTTGCCAAACAGGCAAAAAAACAGGATTAG
PROTEIN sequence
Length: 330
MSAQAADKRTGKRDLGRAHLEAFLEMMSAERGAAVNTLQSYERDLEDLHAFLSGQGVRLTEASASELGAYLSSLAGQGFKPSSQARRLSAMRQFYKFLYAEGLRTDDPTGILDAPKKGRALPKIMGVDEVTRLLTQAEQEAALEGPDRLQRLRMLVLLEMLYATGMRVSELVSLPAKVLDQEGRFLMIRGKGNKERLVPLSHSAISALKTYGRLQAEIAAHAKTPAPESPWLFPAASKQGYLPRQVFARDLKDLAIRAGLTPSMISPHVMRHAFASHLLANGADLRVVQELLGHSDISTTQIYTHVLEERLHQLVQTHHPLAKQAKKQD*