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SCNpilot_expt_1000_bf_scaffold_17479_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

partial RP 30 / 55 MC: 3 BSCG 29 / 51 MC: 2 ASCG 5 / 38
Location: comp(1..1347)

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter, MFP subunit n=1 Tax=Rhizobium sp. CF122 RepID=J3BUP7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 74.2
  • Coverage: 453.0
  • Bit_score: 677
  • Evalue 8.00e-192
  • rbh
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:EJL58526.1}; Flags: Precursor;; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.2
  • Coverage: 453.0
  • Bit_score: 677
  • Evalue 1.10e-191
cation efflux system protein; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB similarity KEGG
DB: KEGG
  • Identity: 74.0
  • Coverage: 447.0
  • Bit_score: 661
  • Evalue 2.40e-187
  • rbh

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Taxonomy

Rhizobium sp. CF122 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1347
TTGAACCTGCCATCGCGTGTGGCAGCCACGCTCTCCCTCGCCGTATTGCTCGGCGGGGGAGGCTATTGGGCTGGCACGAACAATCTGGGTTCCGTTCTTGGCATGGACCTCACCGGGCAGGCATTGGCCGCGCCTACCGCAAAGAAGACCACGCCGACGGGGGCGATCATCTATTACCGCCATCCGAATGGGTTGGCGGAATTCTCTTTGGCTCCCAAGGACGCATCCGACGGTCGTCCCTTCATCCCGGTGCGTGCCAGTGAAGATGTGAGTTTCGACGGAAGCAAAAATGCCGAGCCGTCGACAAGGACAGCCGACGTGGCCCCACCCACCCCATCTAGCAAGGGACGCATCCTATACTACCGCAATCCGATGGGACTGCCTGACACCTCAAAGGTCCCGAAGAAGGACTCGATGGGGATGGACTACATTCCCGTCTTTGACGGCGAGCAGGTCGACGCCTCCACCGTCAAGGTCTCGCTCGGCAAGCTGCAGCGCACGGGCGTGAAGACGGCCATTGCCGAACTGGCTAGTATCGGCCGCAGGATTGAGATCCCTGGCACGGTGACGCTCGATGAACGCCGCGTCAGCGTCGTCTCGATGCGAACGGACACCTTTCTGGATGATGTCGCCAACGTCACGACAGGCGATCATATCACCACGGGAGAGAAGCTCTTCCAGTTCTATTCGAAGGACATTGCCACCGCAGCTTCGGAATATGCCGCAAGTCGCGGCAACAACGATACCGGACCCGCATTGAGGCTGAGGAATCTCGGCGTACCGCAGGAGGTCATCGATACGATCTCCCGCACACATCAGGTGCCAACCAGCATGGGTTACACATCGCCGCGAGACGGCATCGTCCTCGAGCGTCTTGCGACCGCGGGCATGATGGCAAAACCCGGCGATATCCTGTTCCGCATCGCCGACATCTCTCATGTCTGGGTGATCGCCGATGTTCCGGAGTACGACCTTGCCTCCCTGCGGGTCGGTGCAGAGGCATCGATCAAGATCCGCAGTCTTCCCGGCAAGGCGTTCAAAGGGAACGTCGACCTGATTTATCCCGAGGTCGAAGCCCAGACGCGCACAACCAAGGTCCGCATCGAGCTTGCCAATCCGGATGGCGTGCTCCTTGCCAACATGTATGCCGACATCGATATCGAGGCAGCACCGCCCAATCCCGTTGTCAGTGTCCCCAACAGCGCCGTCATCGACACGGGCGATCGCCAGGTCGTCTTCATAGACAAGGGTGATGGCAGGTTCGAGCCGAAGGATGTCAGCCTTGGCATGCGCGGCGACGACAAGACCGAAGTTCGCCGCGGCGTTGCCGTCGGCGACAAGGTGGTC
PROTEIN sequence
Length: 449
LNLPSRVAATLSLAVLLGGGGYWAGTNNLGSVLGMDLTGQALAAPTAKKTTPTGAIIYYRHPNGLAEFSLAPKDASDGRPFIPVRASEDVSFDGSKNAEPSTRTADVAPPTPSSKGRILYYRNPMGLPDTSKVPKKDSMGMDYIPVFDGEQVDASTVKVSLGKLQRTGVKTAIAELASIGRRIEIPGTVTLDERRVSVVSMRTDTFLDDVANVTTGDHITTGEKLFQFYSKDIATAASEYAASRGNNDTGPALRLRNLGVPQEVIDTISRTHQVPTSMGYTSPRDGIVLERLATAGMMAKPGDILFRIADISHVWVIADVPEYDLASLRVGAEASIKIRSLPGKAFKGNVDLIYPEVEAQTRTTKVRIELANPDGVLLANMYADIDIEAAPPNPVVSVPNSAVIDTGDRQVVFIDKGDGRFEPKDVSLGMRGDDKTEVRRGVAVGDKVV